Nelumbo nucifera (sacred lotus): 104587871 Help Entry 104587871         CDS       T04131                                  Name (RefSeq) protein PAT1 homolog 1-like   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism nnu  Nelumbo nucifera (sacred lotus) Pathway nnu03018   RNA degradation Brite KEGG Orthology (KO) [BR:nnu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     104587871  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nnu03019]     104587871 Messenger RNA biogenesis [BR:nnu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      104587871   mRNA degradation factors    5'-3' decay     Decapping complex      104587871 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 TFIIA Motif Other DBs NCBI-GeneID:  104587871 NCBI-ProteinID:  XP_010243929 UniProt:  A0A1U7Z097 LinkDB All DBs Position Un AA seq 826 aa AA seqDB search MDGFDDEGGIQKIPNQKDFKGLAESSSEDARFDASQYAFFGKDVMEEVELGGLEDEDDGV PLIGFDGDEYALSDREELQGEGVGSLSDIDDLASTFSKLNSAVSKPRTAGVIGEMGSFSR ESSSATDWAQDSDFPNWLDTHIFETENVQEGKRWSSQPHSSSAHLGDSKPLYRTSSYPQQ PQQQQHFSEPVLIPKSSFTSYPPPGGRSQASPNQHSHHPNMPSLGGPQLPFSSPNMPPFS NSQLHLQSLPHGLHYGGNLPQFASQSLSMNNRPQGHWGNQANLFPGDHSNLLNNLLQQQL PHSSGLVPQQLMSQQKQQQQRLHHPVQPSLAHFSSLQSQLFGSHSSPPPHVISKYESMLG MAELRDQRTKSTQRGRHNLRFSQQGSDTSSQKSENGWLQIRSKYMTAEEIETILRMQHAA THSSDPYIDDYYHQACLAKKSAGSRLKHHFCPTHLRDLSSRARANTEPHAYLQVDALGRL PFSSIRRPRPLLEVEPPSASADGSIEQNVSEKPLEQEPMLAARITIEDGLCLLLDVDDID RLLQFSQSQDGGMQLRRRRQVLLEGLAASLQLVDPLGKGGRTVGLAPKDDLVFLRLVSLP KGRKLLSRYLQLLYPGGELTRIVCMAIFRHLRFLFGGLPSDTSAAETTINLANTVSACLC DMDLSALSACLAAVVCSSEQPPLRPLGSSAGDGASVLLKSVLDRATELLTNPQAASNYNM QNRALWQASFDAFFTLLTKYCVSKYDSIVQSLLMQAPPNTASIGSEAARAISREMPIELL RASIPHTNEHQRKILLDFAQRSMPVTGFNTHGNGSGGQMNSESVPG NT seq 2481 nt NT seq  +upstreamnt  +downstreamnt atggatggatttgatgatgagggtggcattcaaaagatccccaaccagaaggatttcaag ggattggcagagagttcatcagaagatgcacgctttgatgcatcacaatatgctttcttt ggtaaggatgttatggaggaggttgaactgggtggattagaagatgaagatgatggtgtc ccattaattgggtttgatggtgatgagtatgcgctgtctgatagagaagagttgcagggt gaaggtgtaggatcactatctgatattgatgatcttgcaagcactttttcaaagttgaat agtgctgttagtaaacccagaactgctggagttattggtgaaatgggatctttctctagg gaaagttcatcagctacagactgggcacaagattctgattttcctaactggttagatacg catatttttgaaacagaaaatgttcaggaaggtaaaagatggtcatcacagccacattct tcttctgctcatcttggagactcaaaaccattgtacagaacatcttcatatcctcagcag ccacaacagcagcaacactttagtgaacctgttttaataccgaagtcatcttttacttct taccctcctcctggtggtcgatctcaggcatcaccaaatcagcattctcaccaccccaac atgccatctcttggtggacctcagttacccttctcttcaccaaacatgcctccgttctct aattctcagcttcatttgcagagcctacctcatgggttacattatggtggaaacctacca caatttgcctcccaaagcctctccatgaataataggccacagggccactgggggaaccag gccaacctatttcctggagatcattccaatcttttgaacaacttgttacaacagcaattg cctcattcaagtgggttagtcccccagcagttgatgtctcagcagaagcagcaacaacag agactgcatcatccagttcaaccatctcttgcccatttttcatctctccagtcccaatta tttggtagccattcttctccaccaccacatgtaataagtaagtatgaatcaatgctgggg atggctgaattaagagaccagaggacaaaatcaacacaaaggggtagacataacctgcgt ttttctcaacaaggttctgatacaagtagccaaaagagcgaaaatgggtggctgcagatc agatccaagtacatgactgctgaagagatagaaactattcttagaatgcagcatgctgca acacacagtagtgatccttatatagatgattattaccatcaggcttgtcttgcaaagaag tctgcagggtcaaggttgaaacaccatttctgcccgactcacctgagggacctgtcttcc cgagcacgtgctaacactgagcctcatgcctatctccaggttgatgctttgggaagacta cctttttcttctatacgccggcctcgtcctctccttgaagttgaacctccatctgcttct gctgatggtagcattgagcaaaatgtttctgagaagcctcttgaacaagagccaatgctt gcagcacggattactatagaagatggcctctgtcttcttcttgatgtggatgacattgac aggctcttacaatttagtcagtcccaagatggtgggatgcagctgagacgtcgtcgtcaa gtcctattagagggacttgcagcatcacttcagctagttgatccacttggaaaaggtggg cgcacagtaggactggcccccaaggatgacctggtgttcctacggctggtctctcttccc aagggtcggaagctcctctcaaggtacttacagctcctctatcctggtggcgaacttaca cgtattgtctgcatggcaatttttcgtcacctgaggtttttgtttggtggccttccctct gacactagtgctgctgagacaacaataaatcttgccaacactgtttctgcatgtttgtgt gatatggatctcagtgcacttagtgcttgtcttgctgccgtggtttgctcctcagagcag cctccactgcggccacttggaagctctgctggagatggcgcatctgtcctcttaaaatct gtccttgacagggcaactgaactattgacaaatcctcaggctgccagcaactacaacatg cagaaccgggccctttggcaggcatcttttgatgctttctttaccctactcacaaagtat tgtgtaagcaagtatgacagtattgtgcaatcattgctcatgcaagccccgccaaataca gcatctattgggtcagaggcagcaagagctataagcagagagatgccaattgagctgcta cgtgcaagtattccacacaccaatgagcatcagcggaagatattgctggactttgcacag cgctccatgcctgttactggatttaatacccatggcaatggcagtggaggtcaaatgaat tctgaatcagttcctggttag

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