Nelumbo nucifera (sacred lotus): 104587917
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Entry
104587917 CDS
T04131
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnu03009
]
104587917
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
104587917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_DCAF4
BCAS3_WD40
Beta-prop_IP5PC_F
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
104587917
NCBI-ProteinID:
XP_010243995
UniProt:
A0A822XIY1
A0A1U7YUF0
LinkDB
All DBs
Position
Un
AA seq
424 aa
AA seq
DB search
MSLCSREILLSSSPDGPIMAYDASSGATLAHFTGSHSPRKGLALAGNTMIAASHISSDTA
LGSIHLYNWWSSSAFHHLPLPEPVAPLAATPDGLYLFSGGLSGYIHALLLPSGDLLRSFP
AHSKPVSCLTINDDGSLLISGGDDGAIAVFPVLTLLDASAGDNFSSCQLTLHRFVGHASS
VTSIISGTGGCGSIIVSCSLDCTCKLWSLAQGIHLRTLRFPCMIWGVAMDPTESTLYAGG
SDGRVYVAMLKVASSSRQEVGRGSTELVAWTQEAAGGAITAVKMTNTGRNILTASEDGSI
RIWEVERGGVIKVFGDGGGSVSDLVVAKGVYESCGRSVRFGAGSVESTGCWSLGFSGREL
SRAMGNKVIEMEETLSEVVKDRRRAIGTLETAIGTYERLLELILKEAKEDDTENNGEKNE
HDRR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtgttcacgggagatccttctctccagctctcccgacggcccaatcatggct
tacgatgcctcctcaggtgccacccttgctcactttaccggcagtcactcaccccgtaag
ggccttgccctcgccggaaacaccatgattgccgcttctcatatctcctcagacaccgcg
ttgggttcaatccacctctacaattggtggtcttcttccgcttttcaccatctccccctc
cctgaacctgtcgctccccttgccgccactcccgacggcttgtacctcttttctggtggc
ctctcaggttatatccatgccttgttgcttccatcaggcgatcttcttcgctcctttcct
gcacactcaaagcccgtctcttgcctaacaatcaacgatgatgggtctcttctcatctcc
ggtggtgacgacggtgccatcgcagtattcccggtattaaccctcctggatgcttcagcc
ggcgataatttctcaagttgtcagctcactttgcaccgttttgtcgggcatgcctcgtcg
gtgacgtccatcatctccggcactggtgggtgcggttcgattatagtttcctgctcgttg
gactgcacatgtaagctctggagccttgcacagggcatccacttgcgtacgctaaggttc
ccatgcatgatttggggtgtggccatggatcctacagaatctacgctttacgcaggcggt
tcagatggtcgggtatacgtagcaatgctgaaggtggcctccagttccagacaagaggtg
ggtagagggtcgaccgagttggttgcatggacccaagaggccgccggaggagcaatcacg
gctgttaaaatgacaaacacgggccggaatatactaacagcttcagaagatgggagtatt
cgaatttgggaggtggagagaggtggtgtgatcaaggtttttggggatgggggaggaagc
gtaagtgatctcgtggtggcaaaaggggtatacgagagttgcggtcgcagcgtcaggttt
ggtgcaggtagcgtggaatcaactggttgttggagtctggggttttctggtagggagcta
agtagagcgatggggaataaggtgattgaaatggaagagacgttgagtgaggtggtgaag
gataggagaagagccatcggtacacttgaaacggcaattgggacgtacgagagactcttg
gagcttattctaaaggaagcaaaagaggatgatactgagaataatggtgagaagaatgaa
catgaccgccgatga
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