Nelumbo nucifera (sacred lotus): 104588230
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Entry
104588230 CDS
T04131
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104588230
Transcription machinery [BR:
nnu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104588230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
104588230
NCBI-ProteinID:
XP_010244378
UniProt:
A0A1U7YXW5
LinkDB
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Position
Un
AA seq
558 aa
AA seq
DB search
MGFGLDWKWVFPVQSHLLSHSSTRNHSSFVRSREAYFESARMSFLSVIPEESETLQKDPL
KAYACSSGTLQPVNNGYAAIGVKMNTSKEFHNSLYDTFEDISIATPEDSSAFLASLQARK
ISCFSLLMENVEKIEDIFVSSDLIRLEKGILVQLEKLGALNLFHACLSRTVKVSSALNLH
SALKECSKKYLMDGEMSDHVDHITVPSRRKEERKLRRERESKRASKKPALKSSPKCGIGG
PQQSTISIAKRPASAKSRRLMIARNESEMSRAVKEVSCLERIRSNLEEELGRVISFSSWA
EAVGLDEKELQQRLHFGWYCRDKLLRSTRSLVVYLARNYRGLGIAFEDLLQAGNFGVLQG
AERFDHTRGYRFSTYVQYWIRKSMSTLVAQHSRGVHIPLTLSRAINQIHKTRKSFFNTHG
RYPDDDEISKCTGLSVAKVRLAGKCLRVVGSIDQKMGDSLTVKFMEFMPDTSIKTPEDIV
MRQHMRKDIHKLLQGLHPRERKVLVLRYGLCDGRCRSLEEIGRLFNVTKEWIRKIEKAAM
TKVRTEEVQRNLSEYLHL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcggtctcgactggaagtgggtcttcccagttcaatctcatctcctatcccat
tcctcaaccaggaaccactcctcttttgttagaagcagagaggcttattttgaatcagca
aggatgtcattcctatctgttattcctgaggaaagtgagactctgcagaaagatcctttg
aaagcttatgcatgctcatctggaactttgcaacctgtcaacaatggctatgccgcaata
ggagtgaagatgaacaccagtaaggagtttcacaattcattgtatgatacatttgaagat
atcagcattgctactccagaggattcatctgccttccttgcaagcttacaagcaagaaag
atatcatgttttagtctgttaatggaaaatgttgagaagatagaagatatatttgttagt
tccgacttgataaggctagaaaaaggcattttagtgcaattagaaaagcttggagctcta
aatttattccatgcatgtctctctaggactgtcaaagtatccagtgctcttaatctgcac
tctgcactgaaagagtgttccaagaaatatctgatggatggtgaaatgagtgatcatgta
gatcatataacagttccctcaaggagaaaagaagaaagaaaattaaggagggagagagaa
tcaaaaagggcctctaagaagccagctttgaaatcatccccaaaatgtggtattggaggg
cctcaacagtctaccatttccattgctaaaagaccagcaagcgcaaaaagtagaagactt
atgattgctagaaatgagtcagaaatgtcaagagccgtcaaagaagtatcatgcttagag
agaataaggtcaaatttggaagaggaacttgggcgagttatcagtttcagcagctgggct
gaagctgtgggtcttgatgagaaggagttgcagcaacgcctacattttggttggtattgc
agagataagcttctaagaagtacacgttccttagtggtgtaccttgcaagaaactacaga
ggactgggaatagcctttgaagacctacttcaggcagggaattttggtgttcttcaaggt
gcagagaggtttgatcatacaaggggatacaggttctcaacctatgttcagtactggatt
aggaaatccatgtcaacattggtggcacaacattcacggggggtccatatacctttgaca
ttgagcagagctataaaccagatacataaaactcggaagtccttcttcaacacccatgga
agatatccagatgatgatgaaatttcaaaatgcacaggtctatcagtagctaaagttaga
ttggctgggaagtgcctacgagttgtgggttcaattgatcagaaaatgggagacagcctg
actgtaaaattcatggaatttatgcccgacacctcaataaagactcctgaagatattgtc
atgagacaacacatgaggaaggatattcataaacttcttcaaggcttgcatccaagggag
aggaaggttcttgttctgagatatggactttgcgatggtcgatgcagatctcttgaggag
attggaaggcttttcaatgtgaccaaggagtggataagaaagatagagaaagcagcgatg
acaaaggtaaggacggaggaagtgcagaggaacttgagcgagtacttgcacttgtag
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integrated database retrieval system