KEGG   Nelumbo nucifera (sacred lotus): 104588230
Entry
104588230         CDS       T04131                                 
Name
(RefSeq) RNA polymerase sigma factor sigC
  KO
K03093  RNA polymerase sigma-I factor
Organism
nnu  Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nnu03021]
    104588230
Transcription machinery [BR:nnu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     104588230
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2
Other DBs
NCBI-GeneID: 104588230
NCBI-ProteinID: XP_010244378
UniProt: A0A1U7YXW5
LinkDB
Position
Un
AA seq 558 aa
MGFGLDWKWVFPVQSHLLSHSSTRNHSSFVRSREAYFESARMSFLSVIPEESETLQKDPL
KAYACSSGTLQPVNNGYAAIGVKMNTSKEFHNSLYDTFEDISIATPEDSSAFLASLQARK
ISCFSLLMENVEKIEDIFVSSDLIRLEKGILVQLEKLGALNLFHACLSRTVKVSSALNLH
SALKECSKKYLMDGEMSDHVDHITVPSRRKEERKLRRERESKRASKKPALKSSPKCGIGG
PQQSTISIAKRPASAKSRRLMIARNESEMSRAVKEVSCLERIRSNLEEELGRVISFSSWA
EAVGLDEKELQQRLHFGWYCRDKLLRSTRSLVVYLARNYRGLGIAFEDLLQAGNFGVLQG
AERFDHTRGYRFSTYVQYWIRKSMSTLVAQHSRGVHIPLTLSRAINQIHKTRKSFFNTHG
RYPDDDEISKCTGLSVAKVRLAGKCLRVVGSIDQKMGDSLTVKFMEFMPDTSIKTPEDIV
MRQHMRKDIHKLLQGLHPRERKVLVLRYGLCDGRCRSLEEIGRLFNVTKEWIRKIEKAAM
TKVRTEEVQRNLSEYLHL
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgggtttcggtctcgactggaagtgggtcttcccagttcaatctcatctcctatcccat
tcctcaaccaggaaccactcctcttttgttagaagcagagaggcttattttgaatcagca
aggatgtcattcctatctgttattcctgaggaaagtgagactctgcagaaagatcctttg
aaagcttatgcatgctcatctggaactttgcaacctgtcaacaatggctatgccgcaata
ggagtgaagatgaacaccagtaaggagtttcacaattcattgtatgatacatttgaagat
atcagcattgctactccagaggattcatctgccttccttgcaagcttacaagcaagaaag
atatcatgttttagtctgttaatggaaaatgttgagaagatagaagatatatttgttagt
tccgacttgataaggctagaaaaaggcattttagtgcaattagaaaagcttggagctcta
aatttattccatgcatgtctctctaggactgtcaaagtatccagtgctcttaatctgcac
tctgcactgaaagagtgttccaagaaatatctgatggatggtgaaatgagtgatcatgta
gatcatataacagttccctcaaggagaaaagaagaaagaaaattaaggagggagagagaa
tcaaaaagggcctctaagaagccagctttgaaatcatccccaaaatgtggtattggaggg
cctcaacagtctaccatttccattgctaaaagaccagcaagcgcaaaaagtagaagactt
atgattgctagaaatgagtcagaaatgtcaagagccgtcaaagaagtatcatgcttagag
agaataaggtcaaatttggaagaggaacttgggcgagttatcagtttcagcagctgggct
gaagctgtgggtcttgatgagaaggagttgcagcaacgcctacattttggttggtattgc
agagataagcttctaagaagtacacgttccttagtggtgtaccttgcaagaaactacaga
ggactgggaatagcctttgaagacctacttcaggcagggaattttggtgttcttcaaggt
gcagagaggtttgatcatacaaggggatacaggttctcaacctatgttcagtactggatt
aggaaatccatgtcaacattggtggcacaacattcacggggggtccatatacctttgaca
ttgagcagagctataaaccagatacataaaactcggaagtccttcttcaacacccatgga
agatatccagatgatgatgaaatttcaaaatgcacaggtctatcagtagctaaagttaga
ttggctgggaagtgcctacgagttgtgggttcaattgatcagaaaatgggagacagcctg
actgtaaaattcatggaatttatgcccgacacctcaataaagactcctgaagatattgtc
atgagacaacacatgaggaaggatattcataaacttcttcaaggcttgcatccaagggag
aggaaggttcttgttctgagatatggactttgcgatggtcgatgcagatctcttgaggag
attggaaggcttttcaatgtgaccaaggagtggataagaaagatagagaaagcagcgatg
acaaaggtaaggacggaggaagtgcagaggaacttgagcgagtacttgcacttgtag

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