Nelumbo nucifera (sacred lotus): 104588295
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Entry
104588295 CDS
T04131
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104588295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104588295
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104588295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
104588295
NCBI-ProteinID:
XP_010244465
UniProt:
A0A1U7ZB47
A0A822XNU5
LinkDB
All DBs
Position
Un
AA seq
320 aa
AA seq
DB search
MANLPPALSLNPPYGGPSASSVNANAVQASKDRKMASAEQLVLELSNPDLRENALLDLSK
KREIFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPTLTPVASNRVCNALALLQCVASHP
DTRTLFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGRVLGTMVNSLAEQP
SSRLLKHIIRCYLRLSDNPRACEALRNCLPEMLRDATFSSCLREDPTTKRWLQQLINNVA
GGNRAAAYQTGGGLEHMLGN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcttcccccagcactttcgctcaaccctccttatggcggtcccagcgcttct
tccgttaacgcaaacgctgttcaggccagcaaagaccggaagatggcctcggccgagcag
ttggtgcttgagctcagtaaccctgatctcagagaaaatgctcttcttgatctctccaag
aagagggaaatatttcaagatttagcaccattattatggaattcttttggtaccattgct
gcactcttacaggaaatagtgtccatatatcctgttttatcaccaccaacccttactcca
gttgcatcaaaccgagtttgcaatgcacttgctcttcttcagtgtgtggcttctcatcca
gataccagaactctattcttgaatgcacatattcctttatatctatatcctttccttaac
actacaagcaaaacaagaccttttgaatatttgaggcttaccagtttgggtgttattggt
gcacttgtaaaggttgatgatacggaagttatcagttttcttctctcaactgaaataatt
cccttgtgtttgcgcacgatggagatgggtagtgaactttcgaaaacagtggctacattt
attgttcaaaaaatactgttggatgatgtggggctgcgttatatttgtgctacagcagag
aggttttttgctgtaggccgtgtgttgggaaccatggttaactcacttgctgaacaaccc
tcatctcggctactaaagcatatcattcggtgttaccttagactatctgataatccaaga
gcttgtgaagcattaagaaattgtctgcctgaaatgctaagagatgcaaccttcagtagt
tgtcttcgtgaagatccaacaacaaagcgttggctgcaacaactgattaataatgtggca
ggaggaaaccgggctgcagcatatcaaactggcggaggactagaacatatgctaggaaat
tag
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