Nelumbo nucifera (sacred lotus): 104588638 Help Entry 104588638         CDS       T04131                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism nnu  Nelumbo nucifera (sacred lotus) Pathway nnu03040   Spliceosome Brite KEGG Orthology (KO) [BR:nnu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104588638  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nnu03019]     104588638    03041 Spliceosome [BR:nnu03041]     104588638 Messenger RNA biogenesis [BR:nnu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      104588638 Spliceosome [BR:nnu03041]  Complex B   Other components    Prp19-related factors     104588638  Complex C     104588638 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_19 TPR_15 ARM_TT21 ARM_TT21_C NRDE-2 PPR Motif Other DBs NCBI-GeneID:  104588638 NCBI-ProteinID:  XP_010244955 UniProt:  A0A1U7ZCD1 LinkDB All DBs Position Un AA seq 919 aa AA seqDB search MSISQELYPSQDDLLYEEEILRNPFSLKLWWRYLIARSEAPFKKRAVIYERALKALPGSY KLWYAYLRERLEIVRNLPITHSQYETLNNTFERALVTMHKMPRIWVMYLQSLTEQKLLTR TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGVPIDTSLRVYRRYLKFDPTHIEDFIEFL INSEKWQEAAERLAGVLNDPQFYSIKGKTKHQLWLELCDLLVNHATEVSGLKVDAIIRGG IRKFTDEVGRLWTSLADYYIRRGLPEKARDIFEEGLMTVVTVRDFSVIFDAYSRFEESMI AYVMESLEELGISEDPAVDEGDGGDAFDSDVRLDDKLSKHKFEEKIFRGFWLKDKYDVDL RLARLEHLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMK AVGKPHTLWVAFAKLYENHKDVANARVIFDKAVQVNYKTVDNLASVWCEWAEMELRHKNF KGALELMKRATAEPTVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGTLDSTRTV YERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVK RYGKTKLERARELFENAVEKAPGEDVKPLYLQYAKLEEDYGLVKRAMKVYDQAVKAVPDN EKMSMYEIYIARATEIFGVPKTREIYEQAIESGLPHKDVKTMCMKYAELEKSLGEIDRAR AIYVYTSQLADPRSDGDFWNKWHEFEVQHGNEDTFREMLRIKRTVSATYSQTHFILPEYL MQKDQKLSLEETVDTLKRAGVPEDEMAALEKQLAPAEANAPGKDSNRKLGFVSAGVESQP GVIHTPDGGRKVTANSEDIELPEESDSEDDEKVEIAQKDVPAAVFGDLAKKVETDNDAKD KESEGHLGALERIKRQRRA NT seq 2760 nt NT seq  +upstreamnt  +downstreamnt atgtcgatttctcaggagctataccctagtcaggatgacctgctctatgaagaagaaatt ctcaggaatcctttcagcttgaagttatggtggaggtacttaatcgcacggagcgaagct ccattcaagaagcgagccgtaatctacgagagagctctaaaagctctacccgggagttac aagctctggtacgcttaccttcgagagcgactcgaaatcgttcgaaatcttccaatcacc cattcccagtacgaaaccctcaacaacacattcgaacgagctcttgtcacaatgcacaag atgcctcggatctgggtcatgtaccttcaaagcttgacggaacagaagctcctcactcga acacgtcgcaccttcgatagagctctttgtgctctccctgtcacccagcacgaccgaatt tgggagccctaccttgtatttgtcagccagaagggcgtcccgattgacacatcgcttagg gtttatcgccgctacttgaaattcgatccaacacacattgaggatttcattgaatttctt atcaattctgaaaaatggcaggaggcggcggagaggttagctggggtgttgaatgatcct cagttttactcgattaagggcaagacaaagcaccagttgtggctcgagctctgtgacttg cttgtcaatcatgccaccgaggtttcagggttgaaggtggatgcgataattcgcggcggg attaggaagttcacggatgaggttgggcggctatggacttccctcgcagactattatatt cggagaggactccctgagaaggcaagggatattttcgaggagggattgatgactgtggtc actgtgagagattttagtgtgatatttgatgcttactctcggtttgaagagagtatgatt gcttatgtgatggaaagcttggaagagttaggcattagcgaggaccctgctgtcgacgag ggagatggtggtgatgcatttgatagtgatgtgcgacttgatgacaagctttcgaagcac aagtttgaggaaaagatttttcgtgggttttggcttaaggacaagtatgatgtcgatttg cggttggctcgattggagcatctcatggatagaaggcccgagcttgctaacagtgttctt ctccggcagaatccccacaatgttgaacagtggcatcgaagggtgaagctttttgagggt aatccaactaagcagatactgacttacacagaagctgtgaggaccgtggaccccatgaaa gctgttgggaaacctcatacattgtgggttgcttttgctaagctgtacgagaaccataag gatgttgctaatgctagagtcatttttgacaaggctgtacaagtcaactacaaaacggtg gataatctagccagtgtttggtgtgaatgggccgaaatggaactgagacacaagaacttt aaaggggcattagagctaatgaagcgtgccactgcagaacccacagttgaggtcaaacgg agagttgctgctgatggaaatgagccggtccagatgaagctgcataagtccttgaggcta tggacattttatgtggatttggaggagagcctggggacgttggattccactcgtacagtt tatgagcgcatacttgatttgaggatagcaactccacagattataatcaattatgcattg cttctggaggaacacaagtactttgaagatgcattcaaagtatatgaaagaggtgtaaaa atatttaagtatccacatgtaaaggatatatgggtaacctatctctctaaatttgtcaaa agatatggcaaaacaaagttggaacgagcaagagagttgtttgagaatgctgttgaaaag gcacctggtgaagatgtgaaaccactatatctacaatatgcgaaactcgaggaggattat ggtctagtaaaacgtgcaatgaaagtttatgaccaagctgtaaaggctgtcccagacaat gagaaaatgagcatgtatgaaatttacatagcccgtgccaccgagatttttggtgttcca aagacaagggagatatatgagcaagccatagaatctggtctcccacacaaagatgttaag accatgtgcatgaagtatgctgagctagagaagagcttgggagaaattgatcgtgctcgt gcaatatatgtatacacttctcagcttgcagatccacgatctgatggtgatttctggaac aaatggcatgagtttgaggtgcaacatggaaatgaagacaccttccgagaaatgctccgt atcaagcgtactgtttctgccacttatagtcagacacattttatccttcctgagtacttg atgcaaaaggatcaaaagcttagccttgaggaaactgttgacacattgaagcgagctggt gttcctgaagatgaaatggctgctttagaaaagcagttagcccctgctgaagctaatgca cctggtaaagatagtaatagaaaactgggctttgtgagtgcaggagtagaatcacaacct ggggtcatccatacacctgatggaggcaggaaggtaactgcaaatagcgaggacattgag ttgccagaggagagtgattctgaggatgatgaaaaagttgaaattgcccagaaagacgtt ccggctgcagtttttggtgatttggcaaaaaaagtggagactgataatgatgccaaagat aaagaaagtgaaggtcatcttggtgcccttgaaagaataaagaggcaaagacgggcttag

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