Nelumbo nucifera (sacred lotus): 104588936
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Entry
104588936 CDS
T04131
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104588936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nnu04121
]
104588936
Ubiquitin system [BR:
nnu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104588936
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_6
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
104588936
NCBI-ProteinID:
XP_010245369
UniProt:
A0A1U7Z085
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Position
Un
AA seq
582 aa
AA seq
DB search
MAYSFPEEVLEHVFSFIHSDKDRNAVSLVCKSWYEIERWCRRRIFVGNCYAVSPRIVIRR
FPEVRSVSLKGKPHFADFNLVPEGWGGYVYPWISAMAEAYPWLEELRLKRMVVTDEALEL
ISRSFKNFSALVLSSCEGFTTDGLAAIAANCRNLKELDLRECDVDDRSGNWLSHFPESCT
SLVSLSFSCLEGEVSFSALERLVSRCTNLRALRLNHSVPLDKLPNLLRRAPQLVDLGMGA
YTAELRPELYSRLGNAFAGCKGLKSLSGFWDVVPSYLPATYSVCAGITFLNLSYATIQSP
DLIKLIRQCRNLQRLWVLDYIEDSGLNALAASCKDLEELRVFPSDPFGQEANVSLTEQGL
VSVSEGCPKLQSVLYFCRQMTNAALFTIARNRPNMTRFRLCIIEPRTPDYLTLQPLDAGF
GAIVEHCKDLRRLSLSGLLTDLVFEYIGTHAQKLEMLSVAFAGESDLGLHHVLSGCKSLR
KLEIRDCPFGDKALFVNASKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDERAPP
DLRPESEPIERLYVYRTIAGPRLDMPGFVWTMGDEKSATEFS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcgtttccagaagaggtcttggagcatgttttctcgttcattcactccgat
aaggacaggaacgccgtttccctggtgtgcaagtcttggtacgagattgaaaggtggtgc
cggcgccggatcttcgttgggaactgctacgcagtgagccctaggattgtgatcaggcgg
tttccggaggtccgatctgtgtcgctcaaggggaaaccgcattttgctgatttcaatctc
gtgccggaggggtggggagggtatgtgtacccctggatctcggccatggccgaagcttac
ccgtggttagaggagctgagattgaagcgtatggtggtgaccgacgaggcgttggaactg
atctcgcgttcgtttaagaatttcagtgctttggtcctctcgtcttgtgagggtttcact
accgatggactcgctgccattgctgccaattgcaggaatctgaaagaacttgacttgcgg
gaatgcgatgtggatgatcggagcggcaattggctcagccatttccctgagtcatgtaca
tcactggtctctctcagcttttcatgtctggaaggggaggtgagcttctctgccctggag
cgcttggtgagcaggtgcaccaacctgagggccctccggctcaaccattctgtgcccctt
gacaagcttcctaacctccttcgccgggcccctcagcttgtcgatctgggcatgggtgct
tacacggcagagctccgccctgagctctactccaggcttggaaatgcctttgcaggttgc
aagggtctcaaaagcctatctgggttctgggacgtggttccctcataccttccagctacc
tactctgtatgtgctggaattacatttttgaacttgagttatgccaccattcaaagccct
gatcttatcaaactcatcagacagtgccggaatcttcaacggttgtgggtactggattac
attgaagacagtggactcaatgcccttgcggcatcttgcaaggatcttgaggaactgagg
gtgttcccatcagacccatttggccaggaagctaatgtgtccttgacggagcagggtctt
gtctctgtttctgagggctgccccaagcttcaatcagttctttatttctgccgacagatg
acaaatgctgctctttttaccattgcaaggaaccgtcccaacatgacccgcttccgtctc
tgcatcattgagccccggacaccggattaccttacactgcaaccactagatgctggtttt
ggtgccattgtcgagcactgcaaggatctccggcgcctttcgctctctggtctcctcaca
gacctcgtgttcgagtacattgggacccatgcacaaaagctggagatgctatcagtggcc
tttgctggggagagtgacttgggccttcatcacgtgttgtctgggtgcaagagccttcgg
aagttggagatccgagactgcccgtttggtgacaaagccctctttgtaaatgcatcaaag
ctggagacaatgcgatccctttggatgtcttcatgctcagtgagttttggagcatgtaag
cttcttggtcagaagatgcctaggctcaacgttgaggttattgatgaaagggccccccca
gacttgaggccagaaagtgagcccatagagaggctttatgtttacaggacaatcgcaggg
cctagactcgacatgcctggctttgtttggactatgggtgatgagaaatctgcaaccgaa
ttttcctaa
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