KEGG   Nelumbo nucifera (sacred lotus): 104588996
Entry
104588996         CDS       T04131                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104588996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nnu03041]
    104588996
Spliceosome [BR:nnu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    104588996
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    104588996
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 104588996
NCBI-ProteinID: XP_010245456
UniProt: A0A1U7Z3Y6
LinkDB
Position
Un
AA seq 398 aa
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQFTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRILGAFYLRLTGSDTDVYQYL
EPLYNDYRKLRRKLTDGCFALTHVDEVIDELLTKDYSCDIALPRIKKRWTLESIGRLELR
RSALEDDFEEEEEKEEDEQVMAELEAGAHEKDYYRGRSPARDRDRDRKRDSYRHRERDYD
RDYDRDRGRGRERDRDRDRDRDRDRDRERDRDRDRDRDRYRLREDYGRERERDREDRERD
RRDRDRGRRRSRSRSRSRSRDRKERGGDREGGNRRKRHDRSASPRKRSDGTEEGNAREES
KKKKERKEKKDDGTDHPDPEIAEQNRLRASLGLKPLRP
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggcgaaccgtacggatccggcagccaaaagcattcgagggacgaatcctcagaacctg
gtagagaaaatattgaggtcgaagatctatcaatttacgtactggaaggagcaatgcttc
ggactcactgcggagacgcttgtcgacaaggccatggagctggaccacctcggcggtacc
tatggcggcaatcgcaaaccgacacccttcatgtgccttgtcatgaagatgctccagatt
cagcccgagaaggatatcgtcgtcgagttcatcaagaatgaagactacaaatatgtccgt
attcttggggccttctatttgcgcctcactggatcagacactgatgtataccagtaccta
gagccactatacaatgactatcggaaacttaggcgaaaactaacagatggatgttttgct
ttgactcatgtagatgaggttattgatgaacttttgactaaagattattcctgtgacatt
gctttgccacgtattaagaaaagatggactcttgaatcaattgggagactggaacttaga
agaagtgctttggaagatgattttgaagaggaagaagaaaaggaagaggatgaacaagtt
atggctgaattagaagctggtgctcatgaaaaggattattatcgtgggcggagtcctgca
agggatagagatagggacagaaaacgtgatagttatagacacagggagcgggactatgac
agggactatgatagagaccgtggaagagggcgagaaagagatagagatagagatagagat
agagacagagatagagacagagagagagacagggatagggaccgggaccgggaccgctac
cgcctacgtgaagactatggtcgtgagagagagcgggatagggaggatagagaacgggat
aggagagacagggatcgtgggaggcgaaggagccgttccaggagtaggagcaggagtagg
gatcgcaaggagcgtggtggagaccgtgaaggtgggaatcgcaggaagaggcatgaccgc
agtgccagtcctaggaagcgttcggatggaacagaggaagggaatgctcgggaggagtcg
aagaagaagaaggaaaggaaagagaagaaggatgatgggacagaccacccggatccagag
attgcagaacaaaacaggctacgtgcatctcttggattgaaaccattaaggccgtga

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