Nelumbo nucifera (sacred lotus): 104588996
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Entry
104588996 CDS
T04131
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104588996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104588996
Spliceosome [BR:
nnu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104588996
Complex C
U4/U6.U5 tri-SnRNP related factors
104588996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
104588996
NCBI-ProteinID:
XP_010245456
UniProt:
A0A1U7Z3Y6
LinkDB
All DBs
Position
Un
AA seq
398 aa
AA seq
DB search
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQFTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRILGAFYLRLTGSDTDVYQYL
EPLYNDYRKLRRKLTDGCFALTHVDEVIDELLTKDYSCDIALPRIKKRWTLESIGRLELR
RSALEDDFEEEEEKEEDEQVMAELEAGAHEKDYYRGRSPARDRDRDRKRDSYRHRERDYD
RDYDRDRGRGRERDRDRDRDRDRDRDRERDRDRDRDRDRYRLREDYGRERERDREDRERD
RRDRDRGRRRSRSRSRSRSRDRKERGGDREGGNRRKRHDRSASPRKRSDGTEEGNAREES
KKKKERKEKKDDGTDHPDPEIAEQNRLRASLGLKPLRP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggatccggcagccaaaagcattcgagggacgaatcctcagaacctg
gtagagaaaatattgaggtcgaagatctatcaatttacgtactggaaggagcaatgcttc
ggactcactgcggagacgcttgtcgacaaggccatggagctggaccacctcggcggtacc
tatggcggcaatcgcaaaccgacacccttcatgtgccttgtcatgaagatgctccagatt
cagcccgagaaggatatcgtcgtcgagttcatcaagaatgaagactacaaatatgtccgt
attcttggggccttctatttgcgcctcactggatcagacactgatgtataccagtaccta
gagccactatacaatgactatcggaaacttaggcgaaaactaacagatggatgttttgct
ttgactcatgtagatgaggttattgatgaacttttgactaaagattattcctgtgacatt
gctttgccacgtattaagaaaagatggactcttgaatcaattgggagactggaacttaga
agaagtgctttggaagatgattttgaagaggaagaagaaaaggaagaggatgaacaagtt
atggctgaattagaagctggtgctcatgaaaaggattattatcgtgggcggagtcctgca
agggatagagatagggacagaaaacgtgatagttatagacacagggagcgggactatgac
agggactatgatagagaccgtggaagagggcgagaaagagatagagatagagatagagat
agagacagagatagagacagagagagagacagggatagggaccgggaccgggaccgctac
cgcctacgtgaagactatggtcgtgagagagagcgggatagggaggatagagaacgggat
aggagagacagggatcgtgggaggcgaaggagccgttccaggagtaggagcaggagtagg
gatcgcaaggagcgtggtggagaccgtgaaggtgggaatcgcaggaagaggcatgaccgc
agtgccagtcctaggaagcgttcggatggaacagaggaagggaatgctcgggaggagtcg
aagaagaagaaggaaaggaaagagaagaaggatgatgggacagaccacccggatccagag
attgcagaacaaaacaggctacgtgcatctcttggattgaaaccattaaggccgtga
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