Nelumbo nucifera (sacred lotus): 104590367
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Entry
104590367 CDS
T04131
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104590367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104590367
03012 Translation factors [BR:
nnu03012
]
104590367
Enzymes [BR:
nnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104590367
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104590367
Translation factors [BR:
nnu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104590367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
T2SSE
AAA_19
Rad17
BEX
Motif
Other DBs
NCBI-GeneID:
104590367
NCBI-ProteinID:
XP_010247308
UniProt:
A0A1U7Z2F5
LinkDB
All DBs
Position
Un
AA seq
1029 aa
AA seq
DB search
MSLRCLAGSSCLFYKFLSAGQQGLGIGLQRTSATMSYRPNYQGGRRGGGAGRGGGRGGGA
GGRGGRGGGRGEQRWWDPAWRAERLRQKAAELEVVDEDEWWNKMEQMKKGGEQEMIIKRN
YSREGQQTLADMASQLGLYFHAYNEGKTLVVSKVPLPNYRADLDERHGSTQKEIRMSTET
ERRVGNLLASSKEAVHADDSSCASSQGVKQSSPSVNIIKSESTLDADKAKEKFSVELKNR
QEKMKASDGSKAMQSFREKLPAYKVKAEFLTAVSNNQVLVVSGETGCGKTTQLPQFILEE
EISSLRGADCNIICTQPRRISAISVSARISSERGEALGETVGYQIRLESKRSTQTRLLFC
TTGVLLRLLVQDPDLTSVTHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATIN
ADMFSKYFGNAPTIHIPGLTFPVTDVFLEDLLEKTRYNIKSEFDNFQGNSRRRRRQPESK
KDPLTELFEDVDIDSHYKKYSMHTRQSLEAWSVVQLDLGLVESTIEHICRHEGDGAILVF
MTGWDEISKLLDKIKANSFLGNSSKFLVLPLHGSMPTINQREIFDRPPSNMRKIVLSTNI
AESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYK
LYPKIIHEAMPQYQLPEILRTPLQELCLHIKSLQLGTVSSFLAKALQPPDPLAVQNAIDL
LKTIGALDDMEELSPLGRHLCTLPLDPNIGKMLLMGSIFQCLGPALTIASALAYRDPFVL
PINRKEEADAAKRSFAGDSCSDHIALLKAFEAWKDARNKGRERAFCWDNFLSPMTLQMME
DMRNQFLDLLSDIGFVNKSLGSKAYNQYSDDLEMVCAILCAGLYPNVVQCKRRGKRTAFY
TKEVGKVGIHPASVNAGVYLFPLPYMVYSEKVKTTSIYIRDSTNISDYALLLFGGNLNLS
KTGEGIEMLGGYLHFSASKSVLELIKKLKGELNKLLQRKIEEPGLNIHAESKGVVSAAVE
LLHSRIVRY
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcgttgcttggccggcagctcctgcttgttttacaaatttctttcggcgggt
cagcaggggcttgggattgggttgcagaggacgagcgccaccatgtcttaccgtcctaac
taccaaggtggtcgccgaggcggaggagcaggacgaggaggaggccgagggggtggagcc
ggcggccggggtggccggggtggcggccgtggtgagcagcgctggtgggatcccgcctgg
cgagcagagcgtctgagacagaaggcagccgagcttgaagtcgttgatgaggatgaatgg
tggaacaagatggaacagatgaaaaaagggggtgagcaggagatgattattaagaggaac
tacagtcgtgaggggcaacaaactctggctgatatggcttctcaattgggtctttacttc
catgcatataacgaagggaagacacttgttgtcagcaaagttccgttgccaaattatcgg
gcagatcttgatgagcgtcatggatcaacacagaaagagatccgaatgtccacagagact
gagagaagagtggggaatctcttggctagctcaaaggaagcagtacatgctgatgactca
tcttgtgcatcaagtcaaggagtgaaacaatcatcaccttctgtaaatataataaaatct
gaatcaacattggatgctgataaggccaaggagaaatttagtgttgaactcaagaacagg
caggagaagatgaaggcaagcgatggttcaaaagcaatgcagtcattcagggaaaaatta
ccagcatacaaagtgaaggcagagtttttaactgctgtttccaataatcaggtactagta
gtttcgggagagacaggttgtggaaaaacaacacagcttccccaatttattctggaggag
gaaatatcatctcttcgtggtgcagattgcaacataatatgcactcaacctcgtcgtata
tctgctatatctgtttcagctcggatttcttctgaaaggggggaggctcttggtgaaaca
gtgggttatcagatccgtttggaatcaaaacgctcaacacaaacacggcttctattttgt
accactggagtgctactgcggctgttggttcaagacccagatttgactagtgttacccat
ttgctagtggatgagatccatgaaagaggcatgaatgaggactttctcttgataatttta
cgtgatcttcttcctcggcgcccagatctacgtcttattctaatgagtgcaaccatcaac
gctgatatgttctccaaatactttggaaatgccccaacaatccatataccgggattgact
tttcctgtaacagacgtgtttctagaagatttactggagaaaacacgttataatatcaaa
tcagagtttgacaacttccagggtaattcaaggaggagaaggaggcaaccagaatcaaag
aaagatcctttgactgaattgtttgaggatgttgatattgattctcactacaagaagtat
agcatgcatacaagacaatcacttgaagcttggtctgttgtacagcttgatttgggtctt
gttgaatcaacaattgaacatatttgtcgccatgaaggtgatggagctattcttgttttc
atgactggttgggatgagatatctaagctgttagataaaattaaagctaacagttttctt
ggaaattcaagcaagtttctagttcttccactgcatggttcaatgcctacaatcaatcaa
cgtgaaatttttgacaggccaccaagtaacatgaggaaaattgtgctatcaacaaatatt
gcagagagtagtatcacaatagatgatgttgtgtatgtcatagactgtggaaaagcaaaa
gaaaccagttatgatgctctaaataagctggcttgtctcttgccatcttggatatcaaaa
gcttctgcacatcagagacgaggtcgtgcgggtcgtgtgcagcctggagtttgttataag
ctgtaccctaagataatccatgaagcaatgccccagtatcaattgccagagattcttcga
acacctttgcaagaactgtgcctccatatcaaaagtttgcaacttggaactgttagttca
tttttggccaaggctcttcagccaccagatcctcttgctgttcaaaatgcaattgatctt
ctcaaaacaattggagctctagatgatatggaagagctttctccacttggtcgccatctt
tgcaccctacctctggacccaaatattggaaagatgcttctcatgggatccatctttcag
tgccttggccctgcattaacaatagcttctgcccttgcctatcgtgatccatttgttctt
ccaataaatagaaaggaggaagctgatgctgcaaaaagatcctttgctggtgattcttgt
agtgaccacattgcacttctcaaagcatttgaagcatggaaggatgcaagaaataaagga
agagaaagggcattctgttgggacaatttcttatcacctatgaccttacagatgatggag
gatatgagaaaccaattcctggatctattatcagatattggctttgtcaataaatccctt
ggatccaaggcttacaatcaatacagcgatgatctggagatggtatgtgcaatcttgtgt
gctggcctctatccaaatgtggtgcagtgcaaaagaagaggaaaacggacagcattctac
accaaagaggttggtaaagttggcatccatccagcatctgtcaatgcaggggtttaccta
ttcccactgccttacatggtatacagcgagaaagtaaaaaccaccagcatttacatccga
gattcgacaaacatatcagattatgcattacttctctttggaggcaatctcaatcttagt
aaaactggggagggtattgagatgcttggtgggtacctccatttttcagcatcaaagagt
gtgctagagttgataaagaagctgaaaggtgaactcaacaaacttctacagagaaagatc
gaggaacctgggcttaacatccatgcagagagtaagggggtggtttctgctgctgttgag
ttgttgcatagtcgaattgttcgatactga
DBGET
integrated database retrieval system
