Nelumbo nucifera (sacred lotus): 104590454
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Entry
104590454 CDS
T04131
Name
(RefSeq) uncharacterized LOC104590454
KO
K13217
pre-mRNA-processing factor 39
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104590454
Spliceosome [BR:
nnu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104590454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
104590454
NCBI-ProteinID:
XP_010247428
UniProt:
A0A1U7Z2R0
LinkDB
All DBs
Position
Un
AA seq
1072 aa
AA seq
DB search
MDTSDPSNDLDEPVGSDEAKNLEALITKCSGDFDSWTSLIAEIEKASPDDMGKISLVYDS
FLSEYPLCYGYWKKYANHMARLNTIDKAVEVYERAVQSATYCVNLWVEYCSFGMLLFEDP
VDVRRLFERGISFVGKDYWCYFLWDKYIAFEYSQKQWSSLAYVYIRTLRFPNKKLHSYYD
SFKKLAAIWKDEIECQNKSAKKEQSEVVLNCETREAASYQEKEILGAIKDIFKPAIGLHN
FKGLQKYLLAGEWFYQKARKLDAKIHCFESQIRRPYFHVKPLDANQLENWHHYLDFVEMQ
GDFDWTVKLYERCLIPCANYPEFWMRYVELMETKGGREMANFALVRATQVFLKRVPAIHL
FCARFREQIGDVVGARSAFPRCDPELDSDFIESVAKEANMEKRLGNFGAASNVYEKALQM
AKEKQNSHFLSILYVHFSRFKYMITGSIDATREVLIEGIHHLPYCRLLLEELINFEMMHG
GPRQVNVLDAIVANAISPRSDVSKGLNTQDREDISSLYLEFLDLCGTIHDIMKAWNRHWR
LFPHLMRPPFPCKHPAKGNHTQEMAKEVRRDTLIPLPSCASENDSSHDPFEHPRLNQKFS
VYENPDIQSNNSATGQSQLEEANDVRQEQMQQVTLPAVEEESWQDAVKQNEDAYDLVHEA
HNGPQSTEAVQKYSNKENKLCKASDQESKFDPKLPSLEGLSLNTDHEQDSAHTTSRGCEA
PQETPRSNGSRLQDGGDDKDISVSNMPCTKADDPAGVHSQTENDSPHKAMDPGSPQAQTH
SQSISHTDGPLHHNVINGGNLHQMSFTGQTPRDTNLGFHGYPQAQHPQQWQVSPNSSVQP
AEIHSQMPMNQGYPCQPPSWQIPQVQHGPQVQNQHQVASAHVQTAGALVWPAHNVQQQGF
ACAPHSQVVTQHVSYPQGHVYPYPLQNSEQNGHMQINEAYATQMWQYYYYQQQQQQQHQQ
HVQQLQYQQQSQQQQQLQYHQQQQQQPQQALYHQHQQQPQPPHCHQQQQHPQNQQQQPPQ
HNNHHQQQQQITSLQMQTWNNYYQQVQGVAEHNIEESRPIAHPHPSQQPSNQ
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggatacatccgacccatcaaacgatctcgacgagccagttggttctgacgaggccaag
aatctcgaggctttaattacaaaatgctcaggtgactttgattcatggacttcactcata
gcagagattgaaaaagcatcacctgatgatatggggaagatctctttagtgtatgactcc
ttcttgtctgagtacccactgtgctatggttactggaagaagtatgctaatcacatggca
cggttaaacactattgacaaggctgttgaggtttatgaacgagccgtgcagtcagcaacc
tactgtgttaatctgtgggttgaatactgtagctttggtatgttgttatttgaagatcca
gttgatgttcggagattatttgaaagagggatatcatttgttggaaaggattactggtgc
tatttcctgtgggataaatatattgcatttgagtattctcagaagcagtggagctcccta
gcttatgtttacatccgaaccctgagatttccaaacaaaaagctgcacagctattatgat
agttttaagaaattggctgccatttggaaagatgagatagaatgtcagaataagagtgcc
aaaaaagaacaatcggaggttgtacttaattgtgaaactagagaagctgcatcttatcaa
gagaaggaaatcttgggtgccatcaaagacatcttcaaaccagcaattggcttgcataat
tttaaaggactgcagaaatatttattggctggagaatggttctatcagaaagcaagaaaa
ttggatgcaaagatccattgctttgaaagtcaaatccggaggccttattttcatgtaaag
ccacttgatgccaatcagttggaaaattggcatcactatctcgactttgtggagatgcaa
ggagattttgactggactgtaaaactttatgagagatgcttaattccctgtgctaattac
cctgaattctggatgcggtatgtggaacttatggaaactaaagggggaagagagatggca
aactttgcacttgttcgagcaacacaagtttttctaaagagagtgccagcaattcatctt
ttctgcgctaggtttagggagcaaataggagacgtagttggtgcccgttctgcatttcct
cgatgtgatccagaattggactctgacttcattgaaagtgttgcaaaagaagccaatatg
gaaaaacgtctgggaaattttggagcagcttctaatgtatatgaaaaagcacttcagatg
gccaaagagaaacagaattcacattttctttcaattctttatgttcatttttcacggttt
aagtacatgatcaccggtagcatagatgctactagagaagtcttaattgagggtattcat
catttgccatattgcagattacttttagaggaattaataaactttgagatgatgcatgga
gggccaaggcaggtgaatgtgttagatgcaattgtagccaatgcaatctctccacggtca
gatgtatccaaaggtttaaacactcaagatcgtgaggatatatcaagcttatatttagag
tttctggacctctgtggaaccatccatgatatcatgaaggcatggaatcgtcactggcgg
cttttcccacatttgatgagacctcctttcccatgtaagcatccagccaaagggaatcac
acccaagaaatggccaaagaagtaagacgagatactcttattccccttcctagttgtgct
tctgaaaatgatagctctcatgacccatttgaacatccaaggttaaaccagaaattctct
gtgtatgaaaatcctgatatacagtctaacaacagtgccactggccagtcccaattagaa
gaagctaatgatgtcagacaagagcaaatgcaacaggtaacattaccagctgtagaagaa
gaatcttggcaagatgcagtcaagcagaatgaggatgcttatgatttagtgcatgaagcc
cataatggtcctcaatctacagaggctgtgcaaaagtattccaacaaggaaaacaaactt
tgtaaagcatctgaccaggagtccaaatttgatcctaagttgccttcactcgagggtctt
tcattaaacacagatcatgaacaggattctgctcataccacatctcgtggctgtgaagct
cctcaagaaactcctaggtcgaatggaagcagattacaagatggtggtgatgataaggat
atttctgtatctaatatgccgtgcaccaaagccgatgaccctgctggggttcattctcaa
acagaaaatgattctccacataaggccatggatccaggttctccacaagcacagacacat
tcacaatctatatcgcatacagatggcccattgcatcataatgtcatcaatggaggaaac
ttgcatcagatgagttttaccgggcaaactcctagagataccaatcttggatttcatggg
tatcctcaagcccagcatcctcaacaatggcaggtttctccaaattcatctgtccaacct
gctgaaattcactcccaaatgccaatgaaccaaggttatccctgtcagcctccatcctgg
caaatcccacaggttcagcatggcccccaagtgcaaaaccagcatcaggtggcttctgct
catgttcaaacagcgggtgctctcgtctggccagctcacaatgttcagcagcagggcttt
gcatgtgcaccacattcacaagtggtcactcaacatgtttcctaccctcaaggacatgtt
tatccatatccactgcaaaatagtgaacagaatggacatatgcaaatcaatgaagcatat
gctactcagatgtggcaatattattattaccagcagcagcaacaacaacaacatcaacaa
catgttcagcagttacagtaccagcagcagtcacaacagcagcaacaacttcagtaccat
caacagcagcagcagcagccacaacaagcactgtatcatcaacatcaacagcagccacaa
ccaccacattgccatcaacagcagcaacatccacaaaaccagcagcagcagccaccacaa
cacaataatcaccatcagcagcaacaacagataacatcattgcagatgcagacatggaac
aactattaccaacaggttcaaggagttgctgagcataacattgaagaatctagacctatt
gcacatccccatccttctcagcaaccttctaatcaatga
DBGET
integrated database retrieval system
