Nelumbo nucifera (sacred lotus): 104590500
Help
Entry
104590500 CDS
T04131
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104590500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104590500
Enzymes [BR:
nnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104590500
Spliceosome [BR:
nnu03041
]
Complex A
U2 snRNP components
U2 related factors
104590500
Complex B
104590500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
104590500
NCBI-ProteinID:
XP_010247491
UniProt:
A0A1U7ZH43
LinkDB
All DBs
Position
Un
AA seq
1085 aa
AA seq
DB search
MDEVKHKSRRENAERKEDLKRGALMRSTGRGIEKIERDDRNGEERERKRKEREKLKDREH
RERERGKERDIDREDKDREREKDREHRQRDREDRERERDRDKGRERTRERKEREERERER
EDGEREREREKEKEREKEREREKRXELDRDEDREADDYDRKRQRMEVDYNQERERERKKL
DEEMDKRRRRVQEWHQLRRKKEESEREKCGEVNGDEPKLGKNWTLEGGSDDDEAVVAGKS
EKDVDLQEDAKPASIGADAMVVDSENGSGVPMGQNGGDSVSGEEEIDPLDAFMNSMVLPE
VEKLNSFVDTSKVEDKKSDSKNAQKDGMSNGVQPKKGINKSIGRIIPGEDSDSDYGDLEN
DELPPEDEDDDEFMKRVKKTKAEKLTLVDHSKIQYPPFRKNFYIEVXEISRMTSKEVPAY
RKQLELKIHGKDVPKPVKTWNQTGLVSKISDTIKKLNYEKPMPIQAQALPIIMSGRDCIG
IAKTGSGKTLAFILPMLRHIKDQPPVAPRDGPIGLIMAPTRELVQQIHSDIKKFAKAVGV
NCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRM
FDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEMLARKVLNKPVEIQVGGRSVVNKDIT
QLVEVRPESERFLRLLELIGEWYEKGRILIFVYTQEKCDSLFKDLLRHGYPCLSLHGAKD
QTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDVPNHYKDYVHRVGRTGRAG
RKGCAITFITFISEVDARYAPNLVKALELSEQAVPEDLKALADGFMAKVSQGLEQAHGTG
YGGSGFKFNEEEDEVRKAAKKAQAREYGFEEEKSDSESEDEGIRKAGGDITQQAVLAQVA
ALAAASKVSMASVPTPITAAQFLPNGGLPVTLLGVLGXPGTAAVVPGATLRIVPNEGAAR
AATLAAAMNLQHNLAKIQADAMPEHYEAELEINDFSQNARWKVTHKETLGPISEWTGAAI
TTRGQYYPPGKIPGPGERKLYLFIKRPTEQSVKRAKAEVKRVLEDITNQALSLPGAAQPG
RYSVL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggtgaaacataagtcgaggagagagaatgcggagaggaaggaagatttgaag
aggggagcgttgatgagaagtacagggagagggatagagaagatagagagagatgacaga
aacggagaagaaagagagaggaagaggaaagagagggagaagttgaaagatagagagcac
agagagagggaaagaggtaaagagagagacatagacagagaagacaaagatagggaaagg
gagaaagatagagagcacagacagagagatagagaggatcgggagagggagagagataga
gataaagggagggaacgaacaagagagaggaaagaaagggaagaaagagagcgtgagagg
gaagatggggagagggagagggaaagggaaaaggaaaaggagagggaaaaggagagggag
agggagaagcgttgagaactggatagggatgaggacagggaagcagatgattatgacagg
aaacgacagaggatggaggtggattataatcaggaaagagaacgtgagcggaagaaattg
gatgaggagatggacaagcgaaggaggagagttcaggaatggcatcaattgcgaaggaag
aaggaagaatctgaaagagagaagtgtggtgaagtgaatggggatgaaccaaagttgggt
aagaactggacccttgaaggaggatcagatgatgatgaagctgttgttgcagggaagtcg
gagaaggatgtggacttgcaggaggatgccaagcctgctagcataggtgcagatgccatg
gtggttgattctgagaatggaagtggagtgcctatgggacaaaatggcggtgacagtgtc
agtggggaggaggaaattgacccattggatgctttcatgaattctatggtattgcctgaa
gttgagaaactgaacagttttgtggacacttcgaaggttgaggataaaaaatctgattcc
aagaatgcccaaaaagacggtatgagtaatggagttcaaccaaagaaaggtataaataaa
tctattggaagaataattcctggagaggattctgattcagattatggtgaccttgaaaat
gatgaacttccaccagaagatgaagatgatgatgaattcatgaaaagagtgaagaagacc
aaagctgagaaattaactttagttgatcactcaaagatccagtacccacctttcaggaag
aatttctatattgaagtgnnagagatttcaaggatgacgtccaaagaggtacctgcttac
agaaagcaactagaattgaagatacatggaaaggatgtaccaaagcctgttaagacatgg
aaccagactggtcttgtgagtaaaatatcggatacaataaaaaagcttaactatgagaag
cctatgcccatccaagctcaggcattaccaataattatgagtggtcgagactgcatagga
attgcaaagactggttcagggaaaaccttggcatttattttaccaatgttgaggcatatc
aaagaccaaccacctgttgctcctagggatggtcctattgggcttataatggcacctaca
agggagcttgtccagcagatccatagtgatatcaagaagtttgctaaggcagtgggtgtt
aactgtgtacctgtatatggaggttctggagttgcccaacaaataagtgaattaaagcgg
ggagctgagattgttgtgtgcactccaggtaggatgatagatatactttgtactagtagt
ggaaagataacaaatctccgcagagttacgtatctggttatggatgaagcggatagaatg
tttgacatgggttttgaacctcagattactcgcattgttcaaaatacccggccagatcga
cagacagtactcttctctgccacttttcctcgtcaagttgagatgctggcacgtaaagtg
ttgaacaagcctgtggaaatacaggttgggggaaggagtgtggtgaacaaggacataaca
cagttggttgaggtgagaccagaaagtgaaagatttctaagactcctagagctaattggg
gaatggtatgaaaagggaaggattttaatatttgtctacacacaagaaaaatgtgattct
ttgttcaaagacttgctaagacatggttatccttgcctctctcttcatggagctaaggat
caaacagatcgtgaatccaccatttctgatttcaagagcaatgtctgcaacctgttgatt
gcaacaagtgttgcagcaagggggttagatgtcaaggagcttgagctagtaatcaacttt
gatgtcccaaatcactataaagactatgttcatcgtgttggacggactggtcgggcaggc
aggaaaggctgtgctattacatttataacatttatatcagaggtggatgcaagatatgct
ccaaatcttgtaaaagccctggaactttctgaacaagcagttcctgaagacctgaaggct
ctggctgatggtttcatggcaaaagtaagtcaaggacttgaacaagcccatggcactggt
tatgggggaagtggttttaagttcaatgargaagaggatgaagtgagaaaagctgcaaag
aaagcacaggcaagggaatatggctttgaggaagaaaagtcagattcagagtctgaagat
gaagggatccggaaggcaggaggggacatcacacagcaagctgtccttgctcaggttgct
gctttagctgcagcctccaaggtaagtatggcttcagtgccaacccctatcactgcagca
caatttcttccaaatggaggactacctgtaactttgcttggtgtccttggtntaccaggc
acggcagctgttgttcctggggctacactgcgtattgtccctaatgagggagcagctcgt
gctgcaacattggcagctgccatgaatttgcagcataacctggcaaagatccaagctgat
gcaatgcctgaacactatgaagcagagcttgaaattaatgatttctcccagaatgctcgt
tggaaggtracccataaggaaactttaggtccaatttctgaatggacaggagctgccatt
acaacaagggggcagtattatccacctggtaaaattccaggacctggtgagcgcaagctc
tacctgttcatcaagagacctactgaacagtctgtaaagagagcaaaagcagaggtaaaa
cgtgttttggaggatatcaccaaccaggcattgtcactccctggtgcagcccaaccagga
aggtactcagttctgtga
DBGET
integrated database retrieval system
