Nelumbo nucifera (sacred lotus): 104590685
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Entry
104590685 CDS
T04131
Name
(RefSeq) polyadenylate-binding protein 7
KO
K13126
polyadenylate-binding protein
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03015
mRNA surveillance pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104590685
09123 Folding, sorting and degradation
03018 RNA degradation
104590685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104590685
03041 Spliceosome [BR:
nnu03041
]
104590685
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104590685
mRNA cycle factors
Stress granule specific factors
104590685
Spliceosome [BR:
nnu03041
]
Complex C
Other components
Complex C specific factors
104590685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RBD_DEAH11
RRM_occluded
RRM_3
Nup35_RRM_2
RRM_5
RRM_RdRP1_2
SET_assoc
HOATZ-like
Motif
Other DBs
NCBI-GeneID:
104590685
NCBI-ProteinID:
XP_010247715
UniProt:
A0A1U7Z3F4
LinkDB
All DBs
Position
Un
AA seq
637 aa
AA seq
DB search
MAVPSTVPAQASLYIGDLHPDVTDGQLLETFSVINNLASVRVCRDSLSGRSLGYGYANFV
TTQDAIQAIEKLNHTPLNGKMMRIMWSHRDPDARKSGIGNLFVKNLDDSIDNVRLHKMFS
KYGNILSCKVVTSQDGKSKGYGFVQFESEESAKSAIEKLNDSTVGGKKIYVGNFIKKSDR
VLRSPNAKYTNLYMKNLDQDVSEELLQEKFSEFGKITNLVISKDENGNSKGFGFVNFESP
NDAKQAMEAMNGTQLGSKTLYVARAQKKAEREQILKHQFEERRKEQIQKYKGSNVYVKNI
DDNVGDDELREHFSRCGTITSVKLMRDEKGISKGFGFVCFSTPEEANKAVATFHGCMFRR
KPLYVAIAQRKEERQAQLQLQFSQNMPALGGPSTAVIPAGYPPLYYTPPPGVVSQIPPQQ
GLMYRPLGLRPGWRPSGYAPPPRPAFQPMPLPMIPTAPRQQRQNRGRINGYMLPQGGGNS
VQFMPNLQQPTQSANSLKDSSNQQRVGKTNYVPNGRLRDASNGPIIPSTASNLVGAVSQG
SDMLSSMLAAATPQHQKQILGERLYPLVMKHKPELAAKITGMLLEMDNSELLLLLESPES
LVAKVEEALQVLKLSNTKVAGQDSLHPNYLSTEVAVN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcggttccttctaccgtccctgcgcaagcatcgctttacattggcgaccttcatcct
gacgtcaccgatgggcaactccttgagaccttctccgtcattaataaccttgcgtctgtg
cgggtttgcagagactccttgtccgggcgatccctcggttatggttatgccaatttcgtt
actactcaagacgcaatccaggcaattgaaaaactgaaccacactccgttgaatgggaag
atgatgagaattatgtggtcacatcgtgatccagatgcaagaaaaagtggtataggaaat
ctgtttgtgaagaatctggatgattccattgataatgtgaggcttcacaagatgttctca
aaatatgggaacatcttatcatgcaaagtcgtgacatctcaggatggaaagagcaaagga
tatgggtttgtccagtttgaatctgaggaatcggcaaaaagtgcgatagagaaacttaat
gactccactgttggaggaaaaaagatatatgttggaaatttcataaagaagagtgatcgg
gttttacgcagccccaatgctaaatatacaaatctgtacatgaagaatctggaccaggat
gtgtctgaagaacttctgcaagagaagttctctgagtttggaaaaattactaatctggtt
atctcaaaggatgaaaatgggaactcgaagggttttggatttgtcaattttgaaagccca
aatgatgccaagcaggcaatggaggcaatgaatggaacccaacttggatcaaagactcta
tatgtagcaagagcacagaaaaaggcagagcgggagcaaatcttgaagcatcaatttgag
gaaagacgtaaggagcaaatccagaagtacaagggttcaaatgtatatgtcaagaacatt
gatgataatgttggtgatgatgaattacgggagcattttagtcgatgtggcactattact
tctgtgaagcttatgcgtgatgaaaaaggaataagtaaggggttcgggtttgtatgcttc
tcaactcctgaggaggccaataaagctgtagccacctttcatggatgcatgtttcgccgg
aagcccttgtacgtggctatagcacaaagaaaagaagagaggcaagcacaattgcaactt
cagttttcacagaatatgccagcattagggggtccctcaactgctgttatccctgctgga
tacccacccctttactatacacctcctcctggtgttgtttcacaaattcctcctcagcag
gggcttatgtatcgacctcttggtttgaggccaggatggaggcccagtggatatgcacct
ccacccagaccagcttttcaacctatgccacttcctatgattcctactgcaccaagacag
cagagacaaaatagaggcaggataaatgggtatatgcttccccagggtggtggaaactct
gtccagtttatgccaaatctgcaacagccaactcagtcagcaaattcactgaaagattca
agcaatcaacagcgagtgggaaagaccaactatgtcccaaatgggcgtctgcgtgacgct
agcaatggaccaataatcccatcaactgcttccaatcttgttggagctgtatcccaagga
tcagacatgttaagtagcatgcttgctgctgctacaccacagcaccagaagcagatacta
ggcgagcgcctctatccccttgtcatgaaacacaagcctgaacttgcagcaaaaataacc
ggcatgcttttggagatggacaattcagaattacttctgttgttggaatcacctgaatca
ttggttgctaaagttgaagaagcactgcaggtgctaaagctctcaaataccaaggttgct
ggacaggattcccttcatcccaattacttatcgactgaggttgcagtcaactaa
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