Nelumbo nucifera (sacred lotus): 104591239
Help
Entry
104591239 CDS
T04131
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104591239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104591239
Spliceosome [BR:
nnu03041
]
Complex A
U1 snRNP components
U1 related factors
104591239
Complex B
104591239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
104591239
NCBI-ProteinID:
XP_019052190
UniProt:
A0A1U8Q2C3
LinkDB
All DBs
Position
Un
AA seq
1034 aa
AA seq
DB search
MASNPQSSAAQPLCPPIVGSAGLPQNFGPPISMQFRPVVPVQQPQPFIPAASQQFYPIGQ
GISGSNAGISSAQNQQLQFFQPTQQLPPRPGQPGHGPPSSQAIPISYSQSNRPILSGSSQ
PQQNAQPISGTGIGGTGIPLSSSYTFTPLSYGQPQNNINTFTHYQPVSQMHAHVVPAAGQ
PWLPPGSQSTPLVTPVQQTVQQPSVTAPTVPATAVQPSPTQQSSSDWQEHTSPDGRRYYY
NKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYSKVTKQSKWTMPEELKLSR
EQAEKAASQSIQPETIMASHTSVSVTVSSVEPQSVSANSVSSTPSALIPSLASSPVPVTP
VVAAVNPLSMVASGSQTVPAVLGAATTSAAGVHSTAAAVDATLVNTTTTTTTNIEIVPHQ
DVTTSVDGVSAQDLEEAKKGMAVAGQINIATAEEKTIDDEPLVYANKLEAKSAFKALLES
ANVESDWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRMRQKKARKE
FTKMLEESKELTSSTRWSKAISMFEDDERFKAVERPRDREDLFENYLVELQKKERAKAQE
EHKQNIMEYKQFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYVRDLEKE
EEEQKKIHKEQLRWAERKNREEFRKLLEEHVAAGTLIAKIHWRDYCMKVKDLPAYLAVAS
NSSGSTPKDLFEDVAEELEKQYREDKTRIKDAMKLGKINMASTWTLDDFKSAIADDVGSP
PISDVNLKLIFAELLERIKEKEEKEAKKRQCLADDFSELLYSIKGITASSKWKDSKSLFE
DSQEYRSILEGSFRREIFEEYIMHLQEKAKEKERKREEEKTKKEKEREEKEKRKEKERKA
KEKEREREKGKERSKKDETESENIDATDVYVSKEDRKRGKDKDRDKDKERKHRKRHHSTA
DDISSEKDEKEEPKKSRRHNSDRKKSRKQHAYTPESDGESRHKKHKREHRDGSRRNGAYE
ELEDGELGEDGEIR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaatcctcaatcatctgcggcacagccactttgtcctccaatagttggttca
gctggtcttcctcaaaactttggtcctccaatatccatgcaatttcgacctgtggttcca
gtgcagcaaccacagccatttattccggctgcttctcaacagttttatccgattggccaa
ggaatttctggatcaaatgcaggaatttcttctgcccaaaatcagcaactccagtttttc
caaccaactcaacagctacctccaaggcctggccagccaggtcatggcccaccttcatca
caagcaattccaatttcttattctcagtcaaacaggcctattttatctggatcttcacag
cctcagcaaaatgctcaacctatatctggtactggtataggtggcacgggcatacctctt
tcatcatcatatacttttacaccactgtcttatggccagccacagaataacataaatacc
tttacccactaccagccagtgtctcaaatgcatgcgcatgtggtaccagctgcaggacaa
ccttggttgccacctggaagccaaagcacacctcttgttactcctgtgcaacagactgtt
caacaaccttcagttacagctcctactgttccagcaacagctgttcagcctagccctact
caacagtcctcgtcagactggcaggaacatacttcacctgatggcagaagatattattac
aacaagaagacacggcaatctagttgggagaagcccttagaattaatgacccctattgag
agggcagatgcatcaactgtctggaaggaatttacaactccagaagggaggaagtattac
tatagcaaggttaccaagcaatccaaatggacgatgcctgaggaattgaagttgtctcgt
gaacaggcagaaaaagcagctagtcagagtattcagcctgagactatcatggcctctcac
acctcagtttctgtcactgtctcttcagttgagccacaatctgtttcggctaattctgtt
agctctaccccatctgctcttatacccagtttggcatcaagccctgttccagtgacacct
gttgtagctgctgttaatccactctctatggtagcttctgggtcacaaactgttcctgct
gtacttggtgctgcaacaacaagtgcagcaggtgttcattctactgcagcagcagttgat
gctacattggtcaacacaactactacaacaacgactaatattgagattgtacctcatcaa
gatgtcacaacttctgtagatggagtgtctgctcaggatttggaggaagcaaaaaagggc
atggctgttgcaggccaaatcaatattgctactgcagaggagaaaacaattgatgatgaa
cccttggtttatgctaataagctggaagcaaaaagtgctttcaaagcacttttggagtca
gcaaatgttgaatctgactggacttgggagcaggccatgagggtaataatcaatgacaag
agatacggtgctctgaaaacactcggagaacggaagcaagcatttaatgagtacctcggc
cagaggaaaaaacaggaggctgaagagagacgtatgagacagaaaaaggcacgcaaagag
ttcacaaaaatgctagaagagtccaaagagctgacatcatccacaagatggagtaaagct
atatccatgtttgaggatgatgaaaggttcaaggctgttgaacgacctagagatcgagaa
gatctttttgaaaactatttggtggaacttcagaaaaaggaacgtgcaaaagcacaggaa
gaacataagcagaacataatggaatacaaacaatttcttgagtcgtgtgattttatcaag
gcaaacagccagtggcgtaaagttcaagatcgcttggaggatgatgaaaggtgctcacgt
cttgaaaaaattgatcggttggaaattttccaggaatatgtacgtgacttagagaaggaa
gaagaggagcaaaagaagattcataaggaacaacttagatgggctgagcgtaaaaaccga
gaggaatttcgtaaattattggaagaacatgtagctgctgggacacttatagccaaaatt
cattggcgtgactattgcatgaaggttaaggatttgcctgcttatctggcagttgcatca
aactcatctggttcaacaccaaaagatttatttgaggatgttgctgaagaactggagaaa
cagtatcgtgaagacaagactcgaataaaggatgcaatgaagttgggaaaaattaatatg
gcttcgacatggacacttgatgatttcaaatctgctattgctgatgatgttggttcccca
ccaatatcagatgtcaacttaaagcttatatttgctgagctactagaaaggatcaaggag
aaagaggaaaaggaagctaaaaagcgtcagtgtctggcagatgatttttctgaactactt
tattcaattaagggaataactgcatcttctaaatggaaagattccaaatcactttttgaa
gacagccaagagtacagatcaatcctggaagggagctttaggagggagatctttgaggag
tacattatgcacttgcaagaaaaggcaaaagagaaggagcgcaagcgagaggaggaaaag
accaaaaaagaaaaggagagagaggagaaagaaaagaggaaagaaaaggagagaaaggcg
aaggagaaagaacgtgaaagggaaaagggaaaagagcgatctaagaaggatgaaacagag
agtgagaacattgatgcaactgacgtttatgtctctaaagaggatagaaagaggggtaaa
gacaaggacagagacaaagacaaggaaaggaaacatcgaaaacgtcatcatagtacagcc
gatgatataagctccgaaaaagatgagaaagaggagccaaagaaatctcgtagacataac
agtgacagaaaaaaatcgaggaagcagcatgcttacacgcctgaatcagatggagaaagc
aggcataagaaacacaagagagagcaccgggatggttcccgtagaaatggtgcttatgag
gagcttgaagatggagaacttggagaggatggggaaatccggtag
DBGET
integrated database retrieval system
