Nelumbo nucifera (sacred lotus): 104591406
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Entry
104591406 CDS
T04131
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104591406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104591406
03009 Ribosome biogenesis [BR:
nnu03009
]
104591406
Enzymes [BR:
nnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104591406
Spliceosome [BR:
nnu03041
]
Complex A
U1 snRNP components
U1 related factors
104591406
Complex B
104591406
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
Pre-60S particles
Helicases
104591406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104591406
NCBI-ProteinID:
XP_010248506
UniProt:
A0A1U7ZJK4
A0A822YA03
LinkDB
All DBs
Position
Un
AA seq
877 aa
AA seq
DB search
MAATASASSGPRYAPEDPTLPKPWKGLVDGSTGYLYFWNPETNVTQYERPVASSPMPQKP
SSLPISSSVQIQPSFQGQHHNGGSKEDGRYNGSTNSASSGAKNYQSARGGSSHSHNISNG
SGTYNHGHGQPSRPSTRGHGSSDMGSGLSAESYRHQHEITVSGDDIPTPFTTFESTGFPS
EILREVHHAGFSAPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPGFVHLKRCRNNS
QMGPTVLVLAPTRELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGADIVVAT
PGRLNDILEMRRISLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPK
EVRKIAADLLVNPVQVNIGSIDELVANKAITQYVEVVTPMEKQRRLEQILRSQEPGSKVI
IFCSTKKMCDQLARTITRQFGAAAIHGDKSQGERDYVLNQFRTGRSPILVATDVAARGLD
IKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDAKYASDLVRVLEGANQR
VPPEIRDMAARGGGMGRTRRQWGSGSGGRDGGRGRNNEPNYGGRGGRGGPPLSSGRLERG
QGGRGSDREPRDRDRHDRVYNDGHDVENRERYDRGGYTTNNLDHRAVDRGRIRSRSHSRS
PNKVPGWGRSHSHSPSRSPNKVPGWGRSRSRSPSRSPNKVPGWGHGRSNSKSHSHSRSRS
RSRSHSLDRFGRPLPGRGHSPVHRRETSPNVHRSMGRSPAYQKRQRGSPYHGESERDAGK
PVHSQSPQRERSHSSSDGRANEKETYDSPHQWGRSPAHGRENGGFTNVSGSPYRGDEEEG
MISPEEEGIIPADEEGMIPEDEGDVGRTEEPDSLGKY
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaactgcatctgcttccagtggtccacgttatgcacccgaggatcccacacta
cccaaaccatggaaaggtttggtcgatgggagtacaggatatctttacttttggaatcca
gagaccaatgttactcagtatgagaggcctgttgcctcctcgcccatgccacagaaacct
tcttctctgcctataagttcatctgttcaaattcaaccatcctttcaaggacaacatcat
aatggtggcagtaaagaagatggccgttataatgggagcaccaattctgcaagttctgga
gcaaagaattaccagagtgcaagaggtgggagttctcattcccataatatctctaatggg
tctggtacatacaaccatgggcatggacaaccttcaaggccgtctaccagaggacatgga
tcttcagacatgggaagtggtttatctgcagagtcctatcgccatcaacatgaaataact
gtttccggagatgatatacctacacccttcacaacattcgaatctactggttttccctca
gagattcttagagaggtacatcatgcagggttctctgctccgacaccaatccaagctcag
acatggccaattgctctacaaggtcgtgatattgtggccattgcaaagacagggtcgggg
aagaccttgggttacctaatgccggggtttgttcatctgaaacgttgccgtaataattca
caaatgggtccaactgtactggtacttgctccaacaagggaattggcaacccaaatacaa
gatgaagctgtgaagtttggcagatcatcaaggatttcttgcacgtgtttgtatggtgga
gccccaaaaggtcctcagctgagagatctggaccggggagcagatattgtggttgccact
cctggccggttaaatgatattttggagatgagaagaattagcctccgccaagtttcatac
cttgtgcttgatgaggcagaccgcatgttggacatgggttttgaacctcagatccggaag
attgtgaaagaagtgcctgctcgccgtcagaccctcatgtacacagcaacatggcccaag
gaggtccgcaaaattgcagccgatttacttgttaatccagttcaggttaatattggcagc
atagatgagcttgttgccaacaaagctattacccagtatgttgaagtggtgacaccaatg
gagaaacagagacgattggaacagatattacgatctcaagaacctggctctaaagttata
atcttttgctccaccaagaagatgtgtgaccagttggctcgcaccattacccgccagttt
ggtgcagcagctattcatggtgacaaatcacagggtgaaagggattatgtgttgaaccag
ttccgcactgggagatctccaatactagtagcaactgatgttgcggctagaggactggat
atcaaagacatcagggtggtcatcaattatgattttcccaccggcattgaagattatgtt
cataggattgggaggactggaagggcaggagccaccggtgttgcttatacatttttctgt
gaccaagatgcaaagtatgcatctgatcttgtaagggttttagaaggtgctaaccaacgc
gttccacctgaaatccgagacatggctgcacgtggtggtgggatgggcagaactcgacgc
cagtggggttctggatctggtgggcgtgatggcgggcgtggacggaacaatgaacccaat
tatggtggaaggggtgggcgaggtggccctccactatcatcaggtaggctagagagaggt
caagggggtcgtggatctgatcgtgagcctcgtgacagggataggcacgatcgggtttac
aatgatggccatgatgtggagaatcgtgaaaggtatgatagggggggctacactacaaat
aatttggatcaccgtgctgtggatcggggtagaatccgcagccgcagccacagccgaagc
cccaacaaggtgcctggatggggccgtagccatagccatagccctagccgtagtcccaac
aaggtgcctggatggggtcgtagccgtagtcgtagccctagccgaagccccaacaaggtg
cctggatggggccatggtcgtagcaatagcaagagccacagccatagtcgaagccgtagc
cgtagccgtagccatagccttgacaggtttggtcggcccctgcctggaagaggacattct
ccggtacatagaagagagacttcaccaaatgttcataggtcaatgggccgttcaccagca
tatcagaagcggcaaaggggatcaccataccatggtgaaagtgagagagatgccgggaaa
cctgtccactcccagagtccacagcgtgaaaggtcacacagctcgtctgatgggagagcg
aatgagaaggaaacttatgattcgcctcatcagtggggaagatcaccagctcatggacgg
gaaaatggagggtttaccaatgtgagtggctcaccttatcggggggatgaagaggaaggc
atgatatcaccggaggaagagggcataattccagctgatgaagaaggaatgattccggag
gacgagggggatgtaggaaggactgaagaacctgattcacttggcaaatattga
DBGET
integrated database retrieval system
