KEGG   Nelumbo nucifera (sacred lotus): 104591406
Entry
104591406         CDS       T04131                                 
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104591406
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nnu03041]
    104591406
   03009 Ribosome biogenesis [BR:nnu03009]
    104591406
Enzymes [BR:nnu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     104591406
Spliceosome [BR:nnu03041]
 Complex A
  U1 snRNP components
   U1 related factors
    104591406
 Complex B
    104591406
Ribosome biogenesis [BR:nnu03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    104591406
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 104591406
NCBI-ProteinID: XP_010248506
UniProt: A0A1U7ZJK4
LinkDB
Position
Un
AA seq 877 aa
MAATASASSGPRYAPEDPTLPKPWKGLVDGSTGYLYFWNPETNVTQYERPVASSPMPQKP
SSLPISSSVQIQPSFQGQHHNGGSKEDGRYNGSTNSASSGAKNYQSARGGSSHSHNISNG
SGTYNHGHGQPSRPSTRGHGSSDMGSGLSAESYRHQHEITVSGDDIPTPFTTFESTGFPS
EILREVHHAGFSAPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPGFVHLKRCRNNS
QMGPTVLVLAPTRELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGADIVVAT
PGRLNDILEMRRISLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPK
EVRKIAADLLVNPVQVNIGSIDELVANKAITQYVEVVTPMEKQRRLEQILRSQEPGSKVI
IFCSTKKMCDQLARTITRQFGAAAIHGDKSQGERDYVLNQFRTGRSPILVATDVAARGLD
IKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDAKYASDLVRVLEGANQR
VPPEIRDMAARGGGMGRTRRQWGSGSGGRDGGRGRNNEPNYGGRGGRGGPPLSSGRLERG
QGGRGSDREPRDRDRHDRVYNDGHDVENRERYDRGGYTTNNLDHRAVDRGRIRSRSHSRS
PNKVPGWGRSHSHSPSRSPNKVPGWGRSRSRSPSRSPNKVPGWGHGRSNSKSHSHSRSRS
RSRSHSLDRFGRPLPGRGHSPVHRRETSPNVHRSMGRSPAYQKRQRGSPYHGESERDAGK
PVHSQSPQRERSHSSSDGRANEKETYDSPHQWGRSPAHGRENGGFTNVSGSPYRGDEEEG
MISPEEEGIIPADEEGMIPEDEGDVGRTEEPDSLGKY
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggctgcaactgcatctgcttccagtggtccacgttatgcacccgaggatcccacacta
cccaaaccatggaaaggtttggtcgatgggagtacaggatatctttacttttggaatcca
gagaccaatgttactcagtatgagaggcctgttgcctcctcgcccatgccacagaaacct
tcttctctgcctataagttcatctgttcaaattcaaccatcctttcaaggacaacatcat
aatggtggcagtaaagaagatggccgttataatgggagcaccaattctgcaagttctgga
gcaaagaattaccagagtgcaagaggtgggagttctcattcccataatatctctaatggg
tctggtacatacaaccatgggcatggacaaccttcaaggccgtctaccagaggacatgga
tcttcagacatgggaagtggtttatctgcagagtcctatcgccatcaacatgaaataact
gtttccggagatgatatacctacacccttcacaacattcgaatctactggttttccctca
gagattcttagagaggtacatcatgcagggttctctgctccgacaccaatccaagctcag
acatggccaattgctctacaaggtcgtgatattgtggccattgcaaagacagggtcgggg
aagaccttgggttacctaatgccggggtttgttcatctgaaacgttgccgtaataattca
caaatgggtccaactgtactggtacttgctccaacaagggaattggcaacccaaatacaa
gatgaagctgtgaagtttggcagatcatcaaggatttcttgcacgtgtttgtatggtgga
gccccaaaaggtcctcagctgagagatctggaccggggagcagatattgtggttgccact
cctggccggttaaatgatattttggagatgagaagaattagcctccgccaagtttcatac
cttgtgcttgatgaggcagaccgcatgttggacatgggttttgaacctcagatccggaag
attgtgaaagaagtgcctgctcgccgtcagaccctcatgtacacagcaacatggcccaag
gaggtccgcaaaattgcagccgatttacttgttaatccagttcaggttaatattggcagc
atagatgagcttgttgccaacaaagctattacccagtatgttgaagtggtgacaccaatg
gagaaacagagacgattggaacagatattacgatctcaagaacctggctctaaagttata
atcttttgctccaccaagaagatgtgtgaccagttggctcgcaccattacccgccagttt
ggtgcagcagctattcatggtgacaaatcacagggtgaaagggattatgtgttgaaccag
ttccgcactgggagatctccaatactagtagcaactgatgttgcggctagaggactggat
atcaaagacatcagggtggtcatcaattatgattttcccaccggcattgaagattatgtt
cataggattgggaggactggaagggcaggagccaccggtgttgcttatacatttttctgt
gaccaagatgcaaagtatgcatctgatcttgtaagggttttagaaggtgctaaccaacgc
gttccacctgaaatccgagacatggctgcacgtggtggtgggatgggcagaactcgacgc
cagtggggttctggatctggtgggcgtgatggcgggcgtggacggaacaatgaacccaat
tatggtggaaggggtgggcgaggtggccctccactatcatcaggtaggctagagagaggt
caagggggtcgtggatctgatcgtgagcctcgtgacagggataggcacgatcgggtttac
aatgatggccatgatgtggagaatcgtgaaaggtatgatagggggggctacactacaaat
aatttggatcaccgtgctgtggatcggggtagaatccgcagccgcagccacagccgaagc
cccaacaaggtgcctggatggggccgtagccatagccatagccctagccgtagtcccaac
aaggtgcctggatggggtcgtagccgtagtcgtagccctagccgaagccccaacaaggtg
cctggatggggccatggtcgtagcaatagcaagagccacagccatagtcgaagccgtagc
cgtagccgtagccatagccttgacaggtttggtcggcccctgcctggaagaggacattct
ccggtacatagaagagagacttcaccaaatgttcataggtcaatgggccgttcaccagca
tatcagaagcggcaaaggggatcaccataccatggtgaaagtgagagagatgccgggaaa
cctgtccactcccagagtccacagcgtgaaaggtcacacagctcgtctgatgggagagcg
aatgagaaggaaacttatgattcgcctcatcagtggggaagatcaccagctcatggacgg
gaaaatggagggtttaccaatgtgagtggctcaccttatcggggggatgaagaggaaggc
atgatatcaccggaggaagagggcataattccagctgatgaagaaggaatgattccggag
gacgagggggatgtaggaaggactgaagaacctgattcacttggcaaatattga

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