KEGG   Nelumbo nucifera (sacred lotus): 104591448
Entry
104591448         CDS       T04131                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104591448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104591448
   03009 Ribosome biogenesis [BR:nnu03009]
    104591448
   04131 Membrane trafficking [BR:nnu04131]
    104591448
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nnu04147]
    104591448
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     104591448
Ribosome biogenesis [BR:nnu03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    104591448
Membrane trafficking [BR:nnu04131]
 SNARE
  SNARE associated proteins
   Others
    104591448
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    104591448
Exosome [BR:nnu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104591448
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_33 AAA_16 AAA_2 CDC48_2 AAA_5 AAA_22 AAA_14 TIP49 NPHP3_N RNA_helicase AAA_17 Mg_chelatase nSTAND3 AAA_28 Parvo_NS1 ATPase_2 AAA_18 IstB_IS21 ABC_tran Viral_helicase1 AAA_7 NACHT AAA_24 DUF815 NB-ARC Vps4_C ResIII TsaE AAA_lid_PRS2_C Zeta_toxin SLFN-g3_helicase Zot Molydop_binding
Other DBs
NCBI-GeneID: 104591448
NCBI-ProteinID: XP_010248584
UniProt: A0A1U7ZJT0
LinkDB
Position
Un
AA seq 818 aa
MADSSSSGPDRGQPSSSSDTKSSKRDFSTAILERKKSPNRLIVDEAVNDDNSVVSMNPAT
MEKLQFFRGDTVLIKGKKRRDTVCIVLVDEQCEEAKIRMNKVVRANLRVRLGDVISVHQC
PDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKV
IETDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGSGKTLIAKAVANETGAFFFLINGPEIMSKLAGESESNL
RKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRAHVIVIGA
TNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVAKDTHGY
VGADLAALCTEAALQCIREKMDVIDLEDESIDAEVLNSMAVTNEHFKTALGSSNPSALRE
TVVEVPNVSWDDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR
GNSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP
LPDEASRLQIFKACLRKSPVSRDVDLSALARYTHGFSGADITEICQRACKYAIRENIEKD
IERERKRRENPEAMEEDDTDDVHEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQQFR
GFGSEFRFADRPENAAGGGDTDPFSSAAAAGDDDDLYS
NT seq 2457 nt   +upstreamnt  +downstreamnt
atggcagactcaagctcgtctggaccagatcgtggccagccttcttcgtcatcggatacg
aaaagcagtaagagggatttttctactgcaattttggaacgcaaaaaatctcctaaccgc
cttattgttgatgaggctgtcaatgatgataattctgtggtttcaatgaaccctgctaca
atggaaaagcttcagttttttcggggagacacagttctaattaaggggaagaaacgaagg
gacacagtgtgtattgttcttgttgatgaacaatgcgaagaagcaaaaattagaatgaac
aaagttgtgcgtgctaatctcagggtacgacttggggatgttatctctgttcatcagtgt
ccagatgtgaagtatgggaagcgtgttcacatccttcctattgatgacacaattgagggt
gtgactggcaacctattcgatgcatatttgaagccatatttcttggaatcatatagacct
gtaaggaagggtgaccttttcctagtaagggggggcatgcggagtgttgaatttaaagta
attgagacagatcctggtgagtactgtgttgttgcaccagacacagagatcttctgtgaa
ggagaacctatcaaacgcgaagatgaagagagactaaatgaagttggatatgatgatgtt
ggtggtgtcaggaagcaaatggcacagatacgggagctggtggagcttcctttgaggcat
ccacaactgtttaaatccattggtgtaaagccccctaaaggaatattactctatggtcca
ccaggttctgggaagacccttattgcaaaggcagttgccaatgaaacaggtgctttcttc
ttcttgataaatgggcctgaaataatgtcaaagttggcaggtgaaagtgaaagtaacttg
cgaaaggcttttgaagaagccgaaaagaatgctccttcaatcatatttattgatgagatt
gattccattgccccaaagagagaaaagacacatggtgaggtggagaggcgtatagtatcc
caacttctgactttaatggatggtcttaagacaagagctcatgtgattgtcattggagca
accaacaggcctaatagcattgacccagctttgaggagatttggaagatttgatcgagag
attgacattggtgtgcctgatgaaattgggaggttggaagttcttcgtattcatacaaag
aatatgaagcttgcagaagatgttgatcttgaaagagttgcaaaagatacccatggttat
gtcggagcagatcttgctgctctttgcactgaggctgctctccagtgtattagggagaaa
atggatgttattgacttagaagatgagtcaattgatgctgaggttttaaattccatggct
gtgacaaatgaacacttcaaaactgcactggggtcttctaatccgtcagccttgcgtgaa
acggttgtggaggtgccaaatgtctcatgggatgatatcggtgggttggataatgtcaaa
agagagctacaggagactgtccaatatccggtggagcatcctgaaaagtttgagaagttc
ggtatgtctccgtccaagggtgtcctcttctatgggcctcctggatgtggtaaaacctta
cttgcaaaggcaatagcaaatgaatgtcaagcaaatttcataagtgttaaaggccctgaa
ttactgactatgtggtttggagaaagtgaggctaatgttcgagagatattcgacaaggcg
cggcagtcagctccttgtgtacttttctttgatgaacttgattctattgcaactcagcgt
ggtaattcagttggagatgctggtggggcagcagacagagttttgaaccaacttctgaca
gaaatggatggaatgactgcaaagaagacagttttcatcattggggcaacaaacaggcca
gacattattgacccagcattgctcaggcctggtcgtctagaccagttgatttatatacca
ttgccagatgaggcttcccgtcttcaaatcttcaaagcatgtttgcgaaaatcacctgtc
tctcgagatgttgacctttcagcacttgcaagatatacacatggtttcagtggtgctgat
atcacagaaatctgccagcgtgcttgcaaatatgcaatcagagagaatattgaaaaggat
attgaaagagagagaaagaggagagagaacccagaagcaatggaagaagatgacactgat
gatgtccatgagatcaaagctgcacactttgaagaatctatgaaatatgctcgccggagt
gtgagtgatgctgacatcagaaaataccaactctttgctcagacattacaacagttccgt
gggtttggatcagaattcagatttgcagatcgccctgagaatgctgcgggcggaggagat
acagatccattctcttctgcggcagctgctggagatgatgatgacttgtatagttga

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