KEGG   Nelumbo nucifera (sacred lotus): 104591678
Entry
104591678         CDS       T04131                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
nnu  Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nnu03009]
    104591678
Ribosome biogenesis [BR:nnu03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    104591678
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 ASA1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st PAC11 WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_EML WD40_RFWD3 DSE1_N WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_RIG_2nd WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR41 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 VPS11_N Beta-prop_WDR75_2nd Beta-prop_SCAP PROPPIN TRM82_WD Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_NOL10_N WD_LRWD1 CFAP251_N
Other DBs
NCBI-GeneID: 104591678
NCBI-ProteinID: XP_010248940
UniProt: A0A822YEM8 A0A1U7Z8Y0
LinkDB
Position
Un
AA seq 469 aa
MVREVLVACSDRSMSLGITVWDMNTGDRLLHIPTCASPFHGLLCLRNQFLVASQAHKHGS
FGGGAIFLWPLNKPQSPLRSYPIEAIGPISSTKDGLYLVGGALSGNAYVWEIMSGRLLKT
WRAHPKALNCLAFSGDDSLLISGSCDGVIRIWSMISLLDVTDSGSLPSFIHCWSEHHSSI
TGFLTTGSSSSVLVSSSMDGTCKVWDLISGRLCHTQAFPTSVTAIALDSEKQILFSGIAD
GRIFVNILNVGLGLENSAVISEGPSMVLRGHKGSITALTFSFSGSLLISASEDCTVCLWD
VSDWVITRRFNYQKGRITNLVVIPQSSLVSVVENHQRVCYGLRVPVLDKYPQPVNSSSGT
VTLLPTYCSIEDGNMTTFRSTHSLNQQILDLEQGRTPEALQMKVEMSVENRMWATRMAKH
VTEMNRHLQSRLLDLVQYRLSLSSDPDFSTTERRKKLKLTVHNHLRRNN
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggtgagagaggttttggtggcttgcagcgataggagcatgagtttaggaataaccgtg
tgggacatgaatactggtgatcggctactccacatacccacttgtgcttctccttttcat
ggactgctttgcttgaggaaccagtttcttgtggcctctcaagcgcataaacatgggtct
tttggtggtggtgccattttcctctggcccttgaacaagcctcaatctcctctccgaagt
tatcctatagaggccattgggccaatttcctccacgaaggatgggctttatcttgttggc
ggagctctttctggaaatgcgtatgtttgggagattatgagtggaagactgctaaagact
tggcgtgctcatccgaaagctttgaactgtctggccttttctggtgatgattctcttctt
atttctggttcttgtgatggtgtgatccgtatatggtctatgatcagtttgctggacgtg
acagatagtggaagcttgccttcttttatccattgctggtctgagcaccactcctccata
actggttttttaactacaggcagctcaagctcagttttggtatcgagctctatggatggc
acatgcaaggtctgggacttgatctcaggaaggctttgtcatacgcaagcttttccaaca
tctgtgactgcaattgctcttgattctgaaaagcagatattgttttctggaattgcagat
ggtaggatatttgtcaacatactcaatgttggacttggacttgaaaactctgctgtcatt
tcagaaggcccctcaatggtgctaagaggacacaagggatccataaccgcattgaccttc
agttttagtggatcattgttgatatctgcatcagaggactgtactgtctgcctttgggat
gtctcggattgggtaatcactcgaagattcaactatcagaaagggcggataactaatcta
gtggtgatcccccagtcatcattggtttctgttgtggaaaaccatcagagagtttgttat
gggcttcgtgttcctgtgctggacaagtatcctcagccagtaaacagctccagtggaacc
gtcactctgctacccacatattgttcaattgaagatggtaacatgacaacttttcgaagt
actcattctcttaaccagcagatccttgacttggagcaagggcgaacacctgaagcacta
caaatgaaggtggagatgagtgttgagaaccgaatgtgggcaacgagaatggcgaaacac
gtgacagagatgaacaggcacttgcagtcacgtttattagacttggtacaatacaggtta
tcattatcttcagatcctgatttttctacaaccgaaaggagaaagaagctcaagcttaca
gtccacaatcacctgaggaggaacaattaa

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