Nelumbo nucifera (sacred lotus): 104591678
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Entry
104591678 CDS
T04131
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnu03009
]
104591678
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
104591678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_SPT8
VPS11_N
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
PROPPIN
Beta-prop_DCAF12
PEP5_VPS11_N
WD_LRWD1
VPS8_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
104591678
NCBI-ProteinID:
XP_010248940
UniProt:
A0A822YEM8
A0A1U7Z8Y0
LinkDB
All DBs
Position
Un
AA seq
469 aa
AA seq
DB search
MVREVLVACSDRSMSLGITVWDMNTGDRLLHIPTCASPFHGLLCLRNQFLVASQAHKHGS
FGGGAIFLWPLNKPQSPLRSYPIEAIGPISSTKDGLYLVGGALSGNAYVWEIMSGRLLKT
WRAHPKALNCLAFSGDDSLLISGSCDGVIRIWSMISLLDVTDSGSLPSFIHCWSEHHSSI
TGFLTTGSSSSVLVSSSMDGTCKVWDLISGRLCHTQAFPTSVTAIALDSEKQILFSGIAD
GRIFVNILNVGLGLENSAVISEGPSMVLRGHKGSITALTFSFSGSLLISASEDCTVCLWD
VSDWVITRRFNYQKGRITNLVVIPQSSLVSVVENHQRVCYGLRVPVLDKYPQPVNSSSGT
VTLLPTYCSIEDGNMTTFRSTHSLNQQILDLEQGRTPEALQMKVEMSVENRMWATRMAKH
VTEMNRHLQSRLLDLVQYRLSLSSDPDFSTTERRKKLKLTVHNHLRRNN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtgagagaggttttggtggcttgcagcgataggagcatgagtttaggaataaccgtg
tgggacatgaatactggtgatcggctactccacatacccacttgtgcttctccttttcat
ggactgctttgcttgaggaaccagtttcttgtggcctctcaagcgcataaacatgggtct
tttggtggtggtgccattttcctctggcccttgaacaagcctcaatctcctctccgaagt
tatcctatagaggccattgggccaatttcctccacgaaggatgggctttatcttgttggc
ggagctctttctggaaatgcgtatgtttgggagattatgagtggaagactgctaaagact
tggcgtgctcatccgaaagctttgaactgtctggccttttctggtgatgattctcttctt
atttctggttcttgtgatggtgtgatccgtatatggtctatgatcagtttgctggacgtg
acagatagtggaagcttgccttcttttatccattgctggtctgagcaccactcctccata
actggttttttaactacaggcagctcaagctcagttttggtatcgagctctatggatggc
acatgcaaggtctgggacttgatctcaggaaggctttgtcatacgcaagcttttccaaca
tctgtgactgcaattgctcttgattctgaaaagcagatattgttttctggaattgcagat
ggtaggatatttgtcaacatactcaatgttggacttggacttgaaaactctgctgtcatt
tcagaaggcccctcaatggtgctaagaggacacaagggatccataaccgcattgaccttc
agttttagtggatcattgttgatatctgcatcagaggactgtactgtctgcctttgggat
gtctcggattgggtaatcactcgaagattcaactatcagaaagggcggataactaatcta
gtggtgatcccccagtcatcattggtttctgttgtggaaaaccatcagagagtttgttat
gggcttcgtgttcctgtgctggacaagtatcctcagccagtaaacagctccagtggaacc
gtcactctgctacccacatattgttcaattgaagatggtaacatgacaacttttcgaagt
actcattctcttaaccagcagatccttgacttggagcaagggcgaacacctgaagcacta
caaatgaaggtggagatgagtgttgagaaccgaatgtgggcaacgagaatggcgaaacac
gtgacagagatgaacaggcacttgcagtcacgtttattagacttggtacaatacaggtta
tcattatcttcagatcctgatttttctacaaccgaaaggagaaagaagctcaagcttaca
gtccacaatcacctgaggaggaacaattaa
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integrated database retrieval system
