Nelumbo nucifera (sacred lotus): 104592499
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Entry
104592499 CDS
T04131
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-B-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104592499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104592499
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104592499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_12
ARM_TT21
ANAPC3
TPR_8
TPR_MalT
ARM_TT21_N
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
104592499
NCBI-ProteinID:
XP_010250204
UniProt:
A0A1U7ZNM5
LinkDB
All DBs
Position
Un
AA seq
845 aa
AA seq
DB search
MDSRDSSSSAAAASRDGSPADEDGLLSVTAGLAKEAALLFQSRRFTECIDVLKQLLQKKE
DDPKVLHNIAVAEYFQEGCFDPRKLLEVLNKVKKRSEELVRASGEQIDTLSSLGNNVSSG
SKGSVTSPHQFSSANSTSIAYADEFDTSVATLNIAVILFHLHEYANALSVLESLYQNIEP
IDETTALHICLLLLDVALASNDASKAADVILYIGKAFGFSYISQGDNGNTTHQPPNPVTK
TSSTLSNSTAPDASASDSAANVNASENPLARTLSDEALDYESLLSTLDIGGQNIPRTAGL
PSSNDLSRNSADRPAPAVDLKLKLHLYKVRLLLLARNLKAAKREVKLAMNIARGRDSSTA
LLLKSQLEFARGNHRKAIKLLMTSNNRTESGMPSIFNNNLGCIYHQLKKDHTATIFFSRA
LKSSSALRSEKPLKLSTFSQDKSLLILYNCGLQYLACGKPLVAAHCFQKASLVFHKRPLV
WLRIAECCLLALEKGLLRSNGINGEVRLHVVGKGKWRQLVLEDGSSRSRHLDSVEEDDGL
LGGDSQQKLSMPFARQCLHNALHLLNGFELRQPKADLSNSSLEEDESNQSLKSSNHKNLS
VGDSKTSNATVISASANVNGEVKESKGGASSNTTLQSSVSAYQDIYRRENNMIKQAILAD
LAYVELSLENPLKALSAAKSLLRLPECSRIYIFLGHVYAAEALCRLNRAKEAAEHLSVYI
IDGNVELPYSEEDREKWRVEKSGDGEDSNGGSVASNNLPVEESQGIVFLKPEEARGTLYV
NFATVSAIQGNLDQAYHFATKALATLPNNPRAILTAAYVDLLQGKSQEALVKLKQCSHVR
FVPAV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcgagattcatcgtcgtcggctgcggctgcaagtagagatggctccccggcg
gatgaagatggccttctatccgtcacggccgggctcgctaaggaagctgctttgttgttt
caatcgcggaggtttacggaatgcatcgatgtgttgaaacaactgctgcagaagaaggaa
gacgatccaaaggttcttcataatattgctgttgcagagtactttcaggaaggttgtttt
gatccaaggaagttacttgaagttctcaataaggttaagaagaggagtgaagagcttgtc
cgtgcatctggcgaacagatagacactcttagcagtcttggaaataatgtcagttcagga
tcaaaaggaagtgttacgtcaccacatcagttctcttctgcaaatagtaccagtattgcc
tatgcagatgaatttgacacttctgttgcaacactgaacattgcggtcatcttgttccat
cttcatgaatatgcaaatgcattatcggttctagaatcactgtatcaaaatatagagccc
atagatgagacaacagctcttcacatatgccttttgttattggatgttgcactggcttcc
aatgatgcatcaaaagctgcagacgttattctgtatattggaaaagctttcggttttagt
tatattagtcaaggtgacaatggaaacactacacatcaacctccaaatccagtaacgaag
acttcatctacactaagcaattcaactgctccagatgcatctgcttcagattcagctgcc
aatgtaaatgcttcagaaaaccctttagcgagaaccttatcagatgaggcacttgactat
gaatctcttctgtcaacactagatattggtgggcagaacatacctaggacagctggcctc
ccatcttcaaatgatttatcgagaaactcagctgatcggcctgctcctgctgttgatttg
aagttgaagctgcatctctacaaggttcgacttctgcttctcgcaaggaacctgaaggca
gcaaagcgtgaagttaagctagctatgaacatagcacgtggtagagattcttccacagca
ttgcttttgaaatctcagctagaatttgctcgtggtaatcatcgtaaagcaatcaagctc
ttgatgacatcaaataataggacagaatcagggatgccaagcatattcaacaacaatctt
gggtgcatctaccatcaactaaagaaggaccacacagcaactatatttttttccagggca
ctgaagagtagttcagcactgcggtcggagaagcctcttaagctttcaactttctcacag
gataaatccctccttattctgtacaactgtgggctccagtacttagcctgtggcaaacct
ttggttgctgctcactgtttccagaaggccagtttagttttccacaagcggccccttgta
tggctccggattgctgaatgttgtttactggcacttgaaaaaggacttttgagatccaat
gggattaatggtgaagttagactgcatgttgttggaaaagggaaatggagacaactagtt
ctggaagatgggagctcaagaagtaggcatttggattctgtggaagaggatgatgggttg
ttgggtggtgacagccaacaaaagctctcaatgccatttgctcgacaatgtcttcataat
gctcttcatttattaaatggatttgaattaaggcaacccaaggctgatttgtcaaactca
tccttggaggaagacgagtcaaaccaatcactgaagagctcaaaccacaagaatttatca
gttggggattcaaaaacatctaatgctacagtaatttctgcatcggctaatgtgaatggg
gaagtaaaagaatcaaaggggggagcaagttcgaataccaccctacagagttcagtctct
gcttaccaagatatatacagaagagagaacaacatgattaagcaagctattctagcagac
ctggcatatgtggagttgagcttggaaaaccctttgaaagcactatctgctgccaagtct
cttttgaggcttccagaatgttcaaggatttacatttttctaggccatgtatatgcggct
gaggcattgtgccgcttgaatcgggcaaaagaagcagccgaacatttgtctgtctacatt
atagatggaaacgttgagttgccatacagtgaagaggacagagaaaagtggcgagttgag
aagagtggagatggtgaggactccaatggtggttcggtggcttccaataacctgcccgtg
gaagagtctcaaggtattgtgttcctcaagccagaagaggcacgtgggaccctttatgta
aattttgccaccgtgtctgctatccaaggcaatcttgatcaggcctaccactttgcaacc
aaagcgctagctacattacccaacaatccaagagctattctcactgctgcttatgtcgat
ctcctgcaagggaagtcgcaagaagctcttgtgaagttgaaacagtgcagtcatgttaga
tttgtcccagcagtgtaa
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