Nelumbo nucifera (sacred lotus): 104592769
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Entry
104592769 CDS
T04131
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104592769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104592769
03012 Translation factors [BR:
nnu03012
]
104592769
Enzymes [BR:
nnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104592769
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104592769
Translation factors [BR:
nnu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104592769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
T2SSE
NACHT
AAA_16
AAA_19
ABC_tran
Dicer_dimer
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
104592769
NCBI-ProteinID:
XP_010250590
UniProt:
A0A1U7ZAP9
LinkDB
All DBs
Position
Un
AA seq
1163 aa
AA seq
DB search
MKDRALAFGTVCAPQRLRSVITSSASSGVSTHSLDFDWRENQGLLLSPRSTNFPYLQPQR
QNMQYGRYAYDDYSEDDSDQDFQSASSQKSSTLDNIDEWKWKLTMLVRNKDEQELVSREK
KDRRDFEQLSALATRMSLYCRQYEKVVVFSKVPLPNYRSDLDDKRPQREVIIPLGLQRRV
DTHLREYLYRKPMNKGTFPDATFSRSSSSGSIATDEGLFEQQEPLIPTSVVMEKVLRRRS
LQLRNQQQAWQESPEGQKIQEFRRSLPAYKERDALLNAISQNQVVVISGETGCGKTTQLP
QYILESEIDASRGAFCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRD
TRLLFCTTGILLRRLLVDRNLKGVTHXIVDEIHERGINEDFLLIVLKDLLPHRPELRLVL
MSATLNAEIFSSYFGGAPMIHIPGFTYPVRTHFLENVLETTGYRLTQYNQIDDYGQEKAW
KMQKQALRKRKSPIASVVEDALEAADFREYSLRTRESLRCWNPDSLGFNLIENVLCHICT
KERPGAVLVFMTGWDDINALREQLQAHPLLGDPSRVLVLACHGSMASSEQRLIFEKPEDG
IRKIVLATNIAETSITIDDVVFVVDCGKVKETSYDALNNTPCLLPSWISKAAAQQRRGRA
GRIQPGDCYHLYPRCVYDSFADYQMPEILRTPLQSLCLQIKSLQLGSISEFLSRALQSPE
PLSVQNAIEYLKIIGALAENENLTVLGRHLSMLPVEPKLGKMLILGAIFNCLEPILTVVS
GLSVRDPFLMPFDKKELAESAKAQFSAQDYSDHLALVRAYQGWKDAEREQDGYRYCWENF
LSAQTLKAIDSLRKQFFTLLKDTGLVDEKTATYNAWNHDEHLIRAIICAGLYPGICSVLN
KEKSVSLKTMEDGQVLLYSNSVNARELKISYPWLVFNEKVKVNSVFLRDSTGISDSVLLL
FGGDICREGLDGHLKMLGGYLEFFMKPALAETYTNLKRELDELIQNKILNPKMDLNVHSD
LLSAVRLLVSEDRCEGRFVFGRQVLKPSETLAASIPPCVFSRSGGSGPGGDNSKSQLQTL
VTRAGHEAPTYKTKQMKNNQFRAIVEFNGTQFMGQPCNNKKQAEKDAAAEALQWLTGGAQ
TAPGDIDHMSMLLKKSKKKHQRT
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaccgagccctagctttcggtactgtttgcgctccccagcgcttgaggtccgtg
ataacttcttcggcttcttctggagtctccactcattctctggacttcgattggcgggag
aatcaaggtctccttttgagccctaggagcactaattttccctacttgcaaccacaacgg
cagaatatgcagtatggccggtatgcatatgatgattactcggaagatgactctgatcag
gacttccagtcagcttcttcgcaaaagagttctactcttgataacattgatgagtggaag
tggaagttaaccatgcttgttcgcaataaagatgagcaagaattggtgtcaagggagaaa
aaggacagacgtgattttgagcaactttcagcattggctaccagaatgagtttgtattgt
cgccagtatgaaaaggtagttgtttttagtaaggttccactgccaaactacagatctgat
ttggatgacaagcgtccacagagggaggtgatcataccacttggtttgcaaagaagagtg
gatactcatcttagagaatacctttatcggaaacctatgaacaaaggaacttttccagat
gctacattttcaagatctagcagcagtggcagtattgctaccgatgaagggctttttgag
caacaggaaccactaatacctactagtgttgtaatggagaaagttcttaggcggagaagt
ttgcaactgcgtaatcagcaacaagcttggcaggaatcccctgaaggtcaaaagatacaa
gagtttcgcagaagcctccctgcttacaaagaaagagatgcactattaaatgccatttca
caaaatcaggttgttgtcatctcgggtgaaactggttgtggaaagaccacacaacttcct
caatatattttagaatctgaaatagatgcttcccgtggagctttctgtagtattatttgc
acccagcctagacgaatatctgctatgtctgtttctgaaagagttgctgcagagagaggg
gagaaattgggtgaatctgttggatataaagtgcgactagagggtatgaaaggaagggat
acgcgcctcctattttgtactacaggcatcttgttgaggaggttattggttgatagaaat
ttgaaaggtgtaactcatgycattgtggatgagattcacgaacgtggaattaatgaagat
tttctgcttattgtcctaaaagacctccttcctcatcggccagaactgagattggttttg
atgagtgcaaccttaaatgcagaaattttctcatcctacttcggtggggctccaatgata
catattccaggttttacatacccagtacggactcattttctagagaatgttctagaaacg
actgggtacagattaactcagtacaaccaaattgatgattacggtcaagaaaaggcatgg
aaaatgcagaaacaggctctcagaaagaggaagagcccaattgcttctgttgttgaggat
gcccttgaagctgctgattttagggaatatagcttacggactcgggaatctttgcgctgt
tggaatcctgattctctaggttttaacctcatagaaaatgttctttgccatatatgtaca
aaagaaaggcctggtgctgttttggtatttatgactggttgggatgacataaatgctctg
agagaacaactccaagctcatcctcttttgggagacccgagcagagttctggtgcttgca
tgccatggttcaatggccagctcagagcagaggttaatatttgaaaagcctgaggatggc
ataagaaaaatagttcttgcaaccaacatagctgagacaagtatcaccattgatgatgta
gtttttgttgtcgactgtggaaaggtaaaagagacatcatatgatgcattgaataacact
ccttgcctgcttccttcctggatttcaaaggctgctgctcagcaaagaagaggaagagct
ggccgcattcaacctggtgactgttaccatctctatcccagatgtgtatatgattctttt
gcagattatcagatgccagaaatcttaagaacacccttacaatctctttgtctgcaaatt
aaaagcctacagcttggaagcatttcagagttcctatctagggccttgcagtcacctgaa
ccattgtcggttcaaaatgccattgaatatcttaaaatcattggagcgttggctgaaaat
gagaacctgactgttctaggacgacacttgtcaatgcttccagtggagcccaaactcgga
aagatgctcatattaggggccattttcaactgtttagaaccaatattgaccgttgtttct
ggtttaagtgtcagggatccatttttaatgccatttgacaagaaggagcttgctgagtct
gcaaaagcccaattctctgctcaggactacagcgatcatcttgcacttgtccgagcctac
caaggctggaaagatgctgaaagagagcaagatggatataggtactgctgggaaaatttt
ctttcagcacagaccctgaaagctattgattctcttcggaaacagttctttactttgctc
aaggatactggcctggttgatgagaagacagccacatacaatgcatggaaccatgatgag
cacctcattcgagccatcatatgtgctggcctctaccctggaatttgttcggttctgaac
aaggagaagtcggtatcactgaagacaatggaggatggtcaagtccttttatactctaac
tcggtcaatgctcgggaactcaaaatttcatacccatggctagttttcaatgaaaaagtg
aaagtgaactcagtgttccttagagattctactggtatatctgattctgtgcttctccta
tttggaggagatatttgcagagaggggcttgatgggcacctaaaaatgttgggaggatat
ctagagttcttcatgaaacctgctttggcagaaacttacaccaatctaaagagagagctt
gatgaactaatccaaaacaaaattttgaatcccaagatggacttaaatgtccacagcgat
ctcctatcagcagtaaggttgctggtgtcagaggaccgatgtgagggtaggtttgtcttt
ggccgtcaggtcctaaaaccatcagaaactctagcagcatcgattccgccctgcgtgttt
tcaagaagtggtggaagtgggcctgggggtgataattctaagagtcaattgcaaacatta
gtcaccagagcaggacatgaggcacccacttacaagacaaaacaaatgaagaacaaccag
ttccgagccattgtggaattcaatggtacgcaattcatgggacaaccttgcaacaacaag
aagcaagcagaaaaagatgcagcagctgaggctttgcagtggctcactggcggagctcag
acagctcctggagatatagatcatatgtctatgttgctgaagaaaagcaagaagaaacat
cagagaacttga
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