Nelumbo nucifera (sacred lotus): 104592824
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Entry
104592824 CDS
T04131
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104592824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104592824
03036 Chromosome and associated proteins [BR:
nnu03036
]
104592824
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104592824
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104592824
PBAF complex
104592824
GBAF(ncBAF) complex
104592824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
104592824
NCBI-ProteinID:
XP_010250630
UniProt:
A0A1U7ZAT7
LinkDB
All DBs
Position
Un
AA seq
558 aa
AA seq
DB search
MEDASSKSFPANEPEQDLYTIPSYSSWFTWDEIHETEKQALKEFFDGSSISRTPKIYKEY
RDFIINKYREEPSRRLTFTEVRKYLIGDVCLIHKVFRLLERWGLINFGVPTEDSSGDEKL
KGRLEDGVPNGIRVVSVPNPNKVVLLTPNVKDEAVDKGGFRLPPLASYLDVFGDLMREKG
LICENCGEGCASGRYVSAKQGGFVICVRCFKNENYGESKTADGFKFSDSTSSSDDHGSDV
WTDAETLLLLETVLKHGDDWDLVAQNVQTKSKLDCILRLIQMPFGELMLGSTNGKGGASN
SSGNNINNRQVQANSIDTQEPIKTENQCHENMDETRQIREDETQDPLLKRRCIGSFADSG
GSLMKQVALLATMMGPHIAAAGTKAAIAALCNENEYAQEMFEGEEVSVTNYFGSLTSKNE
PGRVCKVDDMEMGEKCIQSEPQETPQEKLVPLALRFRTGIAAALGTAAAHAKLLADQEDR
EIERLVATIIEMQIRKIHCKIKHFEELELIMEKEYTHIEELKEYFIAERINVICEALRVG
ISRWKDHTSVKSVIGSIF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcgagttcgaaatcctttcccgccaacgaaccagagcaggacctttacacc
ataccaagctattcaagctggttcacctgggacgaaatccacgaaaccgagaaacaggcc
ctgaaggagttctttgatggcagctccatctcaagaacacccaagatctacaaggagtac
agggatttcatcatcaacaagtacagggaagagccttcgcggcggctcacgtttacggag
gttcgtaagtacttgatcggtgatgtctgtttgattcacaaggtgtttcggttattggaa
agatggggattgattaattttggtgtgccgacggaggattcgtctggtgatgagaagttg
aagggcagattggaggatggagtgcctaatggaattcgagtggtctctgttcccaatccc
aataaagttgttcttttgacaccaaatgtgaaggatgaagcggtcgataaaggcggcttc
agactgccgcctctggcgtcttacttggatgtttttggtgacttgatgcgtgagaaaggg
ctgatttgtgagaactgcggggaaggttgtgcttccggacgctatgtgtctgctaagcag
gggggatttgtaatttgtgtaagatgcttcaaaaatgaaaattatggagaaagcaagaca
gcggatggtttcaagttcagtgattccacaagtagtagtgatgatcatggaagtgatgtc
tggactgatgcagagacactacttcttctagaaactgtgttgaagcatggagatgattgg
gatcttgttgcacaaaatgttcaaaccaagagtaaacttgattgcatattaagactcata
cagatgccttttggggagctcatgttgggctcaaccaatggaaagggtggtgctagcaat
tcttctggcaacaatatcaacaacagacaagttcaggccaattcaattgatactcaagaa
ccaatcaaaacagagaaccaatgtcatgagaatatggatgagactaggcagatcagagag
gatgagacccaagaccctctgttaaagcgaagatgcattggttcatttgcagactctggt
gggtcactgatgaaacaggtagctctattggccacaatgatgggtccacatattgcagct
gctggaactaaggctgctattgcagcactgtgcaatgaaaatgagtatgcacaggagatg
tttgagggtgaggaggttagtgtcactaattattttgggtctctcacgtcaaagaatgaa
ccaggcagggtctgtaaggttgatgacatggaaatgggggagaaatgcatacaatcagaa
ccacaggaaactccccaagagaagttggtacctttagctttgcgatttagaactggaatt
gcagcagctctagggacagctgctgctcatgccaagttattagcagatcaggaggataga
gagattgaacgcttagtggcaactattatagagatgcagattaggaagatacactgcaaa
atcaaacattttgaagaattggagctgataatggagaaggaatacacccatatagaggag
ctaaaggagtatttcattgcagagcggatcaatgtcatatgtgaagcacttagagttggc
atctcaagatggaaggatcatacttctgtaaaatctgttataggtagcatattttga
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