Nelumbo nucifera (sacred lotus): 104592908
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Entry
104592908 CDS
T04131
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104592908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104592908
03036 Chromosome and associated proteins [BR:
nnu03036
]
104592908
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104592908
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104592908
PBAF complex
104592908
GBAF(ncBAF) complex
104592908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
104592908
NCBI-ProteinID:
XP_010250752
UniProt:
A0A1U7ZRC8
LinkDB
All DBs
Position
Un
AA seq
548 aa
AA seq
DB search
MSANNNSPAKSVGAQSPFGSAGMVSPSMPINHPSHLHPQSQAQTQPVPHFQFQSPLQSQA
QALAQAQAQAQARAQVQAQAAHAQFQAQLQAQSQSLTQTQSPGVGLVGASSPSLSSPGTA
TAKRVVQKPPARPPAPATASTSSPFKTMELTPAARRKKRKLPDKQLPDRVATLLPESALY
TQLLEFEARVDAALARKKIDIQESLKSPPCIQKTLRVYIFNTFANQTRTIPEKQNLEPPS
WSLKITGRILEDGVDPDPTGVIQKPSSLHPKFSSFFKRITINLDPSLYPNNSTIVWESAR
SPAPHEGFEVKRRGDKEFTVNIRLEMNYMPEKFKLSPALIELLGIEVDTRPRIIAAIWHY
VKARKLQNPTDPSFFACDPPLRKVFGEEKMKFAMVSQKISQHLSPSQPIHLEHKIKLSGN
SPAGNACYDVLVDVPFPIQKEMSAFLANTEKHKEIDACDEAICAAIKKIHEHRRRRAFFL
GFSQSPMEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNRKTAG
GSDAPAST
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgaacaacaatagcccagcgaagagtgttggggctcagtccccttttggtagt
gctgggatggtatctccatctatgccgataaaccacccttcccatctacatcctcagtca
caagctcagacacaacctgtcccacactttcaattccagtcacctcttcagtcccaagca
caagccttggcccaggctcaagcccaagcccaagctcgtgctcaagttcaagctcaagca
gctcatgcccaatttcaagctcagctacaagctcaatcacagtctcttacccagacacag
tcccctggggttggacttgtaggtgcatcgtctccctccctttcatcacccggcacagca
actgccaagcgggttgtccagaaacctcctgcacggcctccggctcctgctactgccagc
acatcttcgccatttaaaacaatggagctaacacctgctgctcgtagaaaaaagaggaaa
cttccagacaagcagctaccagacagagttgccacgcttttgcccgagtctgccctgtat
acccagctgcttgagtttgaggcacgggttgatgctgctcttgcaagaaagaagattgat
attcaggaatcccttaagagccctccttgcattcagaagactcttcgagtttatatcttc
aacacttttgctaatcagacccgaacgatcccagagaagcagaatttggagcccccttcc
tggtcacttaagataactgggaggatcttggaagatggagtggatcccgaccctactggt
gtaatccagaaaccaagttcattacacccaaagttctcttcctttttcaagagaattact
attaacttggacccgagtctttatcctaataactctactattgtatgggaaagtgctcga
tcgcctgcacctcatgaaggttttgaggtaaaaaggagaggggataaggaatttacagtg
aatatacgattagagatgaattacatgcccgagaaatttaagctctctcctgctttgatt
gaacttcttggtattgaagtcgatacccgcccaaggattatagctgcgatatggcattat
gtgaaggctaggaagctgcaaaacccaaccgatccttctttctttgcttgtgatccacct
cttcgcaaagtatttggggaagagaagatgaaatttgcaatggtttcgcagaagatatca
cagcatttatccccatctcagcctatacatttggaacacaagatcaagctttctgggaac
agtccggctgggaatgcttgctatgatgtattagttgatgttccttttccaatacagaag
gaaatgtcagctttcttggccaacacggagaagcacaaagagattgatgcatgtgatgaa
gcaatttgtgctgccataaaaaagatccatgagcatcgtaggaggagagctttctttctt
gggttcagtcaatctcctatggagtttatcaatgctttgattgcttcccaaagcagggac
ctgaagcttgttgcaggggaagctagtcgtaatgctgaaaaagagcgacgttcagacttt
tacaaccaaccatgggttgaagatgctgtcattcgatatctgaaccgcaagactgctgga
ggaagtgatgctccggcaagcacatga
DBGET
integrated database retrieval system
