Nelumbo nucifera (sacred lotus): 104593013
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Entry
104593013 CDS
T04131
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu00040
Pentose and glucuronate interconversions
nnu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104593013
Enzymes [BR:
nnu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104593013
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
104593013
NCBI-ProteinID:
XP_010250930
UniProt:
A0A1U7ZDQ8
LinkDB
All DBs
Position
Un
AA seq
406 aa
AA seq
DB search
MASPLLPLLVLFAAALLVAPTLINSSAVQDPELVVKEVERSINTTRRNLGFLSCGTGNPI
DDCWRCDPNWEKNRQRLADCAIGFGKQAIGGRDGRIYVVTDSGDDDPVNPKPGTLRYAVI
QDEPLWIIFARDMVIQLKEELLMNSFKTIDGRGASVHIAGGPCITIQYVNNIIIHGLNIH
DCKQGGNANVRDSPEHYGWRTISDGDGISIFGGSHVWVDHCSLSNCHDGLIDAIHGSTAI
TISNNYMTHHDKVMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTINSQGNRFVAPDDRFSKEVTKHEDAPESEWKNWNWRSEGDLMMNG
AFFTPSGAGASSSYAKASSLGARPSSLVGSITMSAGALGCKKGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccattactcccacttctggtcctctttgcagcagcattacttgtagctcca
accctcattaactcctcagcagttcaagaccccgaattggtggtgaaagaggttgagagg
agcatcaacaccactagaagaaatttgggcttcctctcttgcggaacaggaaaccccatc
gacgattgctggcggtgcgaccccaattgggagaagaatcgtcaaaggctagccgattgt
gcaattgggttcgggaagcaggccattggtggaagggatggccgcatctatgtcgtcact
gactccggcgacgacgaccccgtgaacccaaagccggggaccctccggtacgccgtgatc
caagatgagccattgtggatcatcttcgcacgcgacatggtgattcagctcaaggaagag
ctactaatgaactcgttcaagaccatcgacggcaggggtgccagcgttcacattgccggt
gggccatgcattaccatacagtacgtgaacaacattatcatacacggcctcaacatccat
gactgcaagcagggcgggaatgccaatgtgagagactccccggagcactatgggtggagg
accatctccgatggtgatggaatctccatatttgggggtagccatgtgtgggtggatcac
tgctctctctccaactgccatgatggactcatcgatgccatccacggatcaactgctatc
accatttctaacaattacatgacccaccatgacaaagtgatgctcttgggccacagtgac
acctacacccaagacaagaacatgcaagtcactattgccttcaaccactttggagaaggg
ctggtgcaaaggatgccaaggtgtagacatggatacttccatgtggtgaacaatgactac
acccactgggagatgtacgccattggagggagtgcttcaccgaccatcaacagccaaggg
aatagatttgtggcaccggatgatagattcagcaaagaagtgaccaaacatgaggatgca
ccagagagtgaatggaagaactggaattggaggtctgaaggagacctaatgatgaatggt
gccttcttcacgccatctggtgcgggagcgtcgtcgagctatgctaaggcttccagtttg
ggtgccagaccatcttctctggtgggttccattacgatgtcggcgggtgcactcggttgc
aagaagggttcgcgttgctga
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