KEGG   Nelumbo nucifera (sacred lotus): 104593496
Entry
104593496         CDS       T04131                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104593496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104593496
   03041 Spliceosome [BR:nnu03041]
    104593496
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104593496
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104593496
Spliceosome [BR:nnu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104593496
SSDB
Motif
Pfam: RRM_1 RRM_7 dsDNA_bind Nop14 Tim54
Other DBs
NCBI-GeneID: 104593496
NCBI-ProteinID: XP_010251672
UniProt: A0A1U7ZS69
LinkDB
Position
Un
AA seq 451 aa
MAKRKPVAVEEQVSSEDEEQMNVEENEPSQEEDEEEEEEEEGGGDGDEKVEGANSSSEEE
EEEEEEKKEDDSEEEEDEEDEGSKRESVRTLLEPFGKDQLIEILKEAALRDRSIISRITQ
AAESGPVHRKIFVHGLGWDATTETLVSVFKQYGQIEECNVVTDKLTGKSKGYGFVLFKTR
AGARKALQQPQKKIGNRMTACQLASFGPIPSHPAPDATGRKIFIANVGPHVNPEKLRAFF
SKFGEIEEGPLGYDRVTGKLKGFAIFVYKTTEGCKKALEEPVKVFEGCKLQCQRAVEGLR
ANSIKNQVGVVAGTGAALPPNDLALTYAMGLNPGMVNPNLLVAQNPGIGILNPAVGTSLT
QTGLSPSVAGGLSPSVNRSGATPPLGLSSAYGGQAGINSISPSVIGSYGSQAALQGLGAY
QSAHLGQSSAAATRSQSGLGSVGSLPPYFGR
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcgaagagaaagcccgttgcggtagaagagcaagtctcatccgaagatgaagaacag
atgaatgtagaagaaaatgaaccttcacaggaagaagatgaagaagaggaagaggaggaa
gaaggaggaggagatggtgatgaaaaagtagaaggcgccaattcttcatctgaagaagaa
gaagaggaggaggaggaaaaaaaagaagatgacagcgaagaagaagaggacgaagaagat
gagggctcaaaaagagaatctgtgcggacgcttcttgagcccttcgggaaagaccagcta
atcgaaatcctcaaggaagctgctctcagggaccggtccattatctctcgtatcacccag
gccgccgagtccggccccgtccaccgcaaaatcttcgtccacggcctcggctgggacgcc
accaccgaaaccctagtttccgtttttaagcagtacggtcagatcgaggaatgcaacgtt
gtcaccgacaaactcaccgggaagtccaagggctatgggttcgtcctcttcaagacccgt
gctggtgcccgcaaagcccttcagcagccacagaagaagattgggaaccgtatgacggcc
tgccagcttgcttcgtttgggccgatcccgagccacccggctcctgatgcgacgggacgg
aagatattcatcgcaaatgttggacctcatgtgaatccggagaagctgcgtgctttcttt
tcgaagtttggggagattgaggaagggccattggggtatgaccgtgttactgggaagctt
aagggttttgccatatttgtttataagacaacggagggatgtaagaaagctttggaagaa
ccagtgaaggtatttgagggttgcaaattgcagtgtcagagggcagtggaaggtctacgg
gctaatagtattaaaaatcaggtgggagttgttgctgggacaggtgctgctttgccccca
aacgatcttgctctcacttatgcaatgggattgaatccagggatggtcaatccgaatcta
ctggtggctcaaaatccaggaattgggattttgaatccggccgtgggaacgtccctgact
cagacggggttgtcaccttccgttgctggtggattatcaccttctgtgaaccggagtggg
gcgactcctccgttgggattaagttcagcgtatggtgggcaagcagggataaatagcata
agccctagtgtaattggtagttatggctctcaggcagctttgcaggggctgggtgcttac
caaagtgcacatttaggccaatcctctgcagcggcaacgaggtctcaatctggtcttggg
tctgtaggttccttgccgccttacttcggacgctag

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