Nelumbo nucifera (sacred lotus): 104593642
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Entry
104593642 CDS
T04131
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104593642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104593642
Enzymes [BR:
nnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104593642
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104593642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
104593642
NCBI-ProteinID:
XP_010251904
UniProt:
A0A1U7ZE36
A0A822ZI07
LinkDB
All DBs
Position
Un
AA seq
1676 aa
AA seq
DB search
MAHVTEGATEHVEAVRFSFLTDEEVRNLSFKKITNPTIFDNVERPLPGGLYDPALGPLDD
RTPCQSCGQRSFHCPGHCGHIDLVLPVYNPLLFKILFALLQRVCFFCHKFKAKEEQVQKY
ASQLELIIKGDVAGAKNLESVLASESSFPDKHELTHKTSESSSLEENDLTHKTDTAIHSV
DQNCNPMHLQEHHWTSLQYKEAMSVLGDFMKDKHSRCQNCGAKSPSITCPTFGWFHMNMS
NADIRANVLRGCKLSDTFVHGAAQRSHTAEAENVDDVLARGDDADILESSGAVSDGTLEF
VTETDKKIGEHIPPDFFSQRKFLSGPLLPPEVKETMRLLWKNEARLCSLICDIQHERLHV
SGMNARHSMFFTEALLVPPIKFRPPAKSGDSVMEHPQTVLLGKVLQSNIALGNAHANSSD
RSKIIPRWMDLQQTVNILYDSKTSGQRDNTATGICQLLEKKEGIFRQKMMGKRVNYACRS
VISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEHHPGATHYVDKLAT
VKLPPSRKMRMSISRKLPSSRGAVTQPGKNLEYEFEGKVVYRHLQDGDIVLVNRQPTLHK
PSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANKQY
VVPTSGQPIRGLIQDHIISAVLLTKRDTFLTRDEFSQLLYSSGVSATALGYFVGKPGQKI
STINSEEELEPVLPAIWKPEPLWTGKQVITAVLNHITRGRTPFSVRKAGKTPEEYFGKTS
GEYELLIHKNELVHGVIDKAQFGGYGLVHTVQELYGSNAAGVLLSVLSRLFTIFLQMHGF
TCGIDDLLIVHRYDLERMKKLDKNEQIGEFEHWQFVGCADGDKDPIKLQVEIEKAIRRNG
DSAVTRLDRRMSGAMNKLTSEVNKNLFPEGLCKPFPKNCLSLMTATGAKGGMVNSTQICS
LLGQQELEGKRVPRMVSGKTLPCFPPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREG
LVDTAVKTSRSGYLQRCLVKNLEGLKVCYDYTVRDADGSVVQFIYGEDGIDVHKTSFLEE
FEALAANHRIVQERFNNQLDSEVLFKYDYIKKLPVALEGKAKDYIDTLSKKKLKSLNLRK
RKDFMKLMRSKYISSLAQPGEPVGVVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRL
QEILMRASEKIQTPVMTCPLRKGKTEDDAKRLAAKLQKVTVADVIESMEVGVVPFSVKKH
QVSTVYKLKLKLYPPELYPPYSGITLKDCQATLKFVFVGEMEDAIQSHLLMLSKIRGITN
VVHSTQSNSGDGADEDGPTSKSQAAEENDDAGDDDDYEAPDDLGADAQKRKRQATDEMDY
EDDMENEIVNTENGRSDIEASAGFESEIDQAEVEAGNIMDGEIQVFDAEDEASQTPSQHG
TVSKSKSSGGKDEADARGMTRRTKKDSDRAFFMVAEGLDFEVHFRFTNEPHILLAQIAQK
TAKNVYVKRSGNIELCSVVVPKKADGEPEIPELQTSGVDFPTFWNMQDDLDIRRLKSNDI
HAVLNTYGVEAARATIIEQVNQVFKSYGIAVNIRHLSLIADFMTQTGGYRPMSRFGIAET
ISPFSKMSYETASRFVIEAAYHGEMDNLESPSARICLGLPVKMGTGCFDLMQKINI
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggctcacgttacagagggggcgacagaacatgtggaggcagttcgctttagcttctta
acagatgaagaagtgaggaacctcagtttcaagaagattacaaatccgactatattcgat
aacgtagagagaccactgcctggtggtctgtacgatccagcattgggtccattggacgac
aggacaccttgtcaatcatgtggtcagcgttcattccactgtccaggtcattgtggccat
attgatcttgtattaccagtctacaacccactactattcaaaattctttttgctcttcta
caaagagtttgtttcttttgccacaaatttaaggctaaagaggaacaggttcagaaatat
gcttctcaactggagctcataataaaaggagatgttgctggggctaaaaatttagagtca
gtgttggctagtgaatcctcattcccagacaaacatgaattgactcacaagacaagtgaa
tcctcatctttggaggaaaatgacttgactcacaagacagatactgccattcattctgtt
gatcagaactgcaaccccatgcatttgcaagagcaccattggacttcacttcaatacaag
gaggcaatgtccgtgttgggtgactttatgaaggacaagcatagcaggtgtcaaaactgt
ggtgccaaaagtcctagtataacctgtcctacttttggttggtttcacatgaacatgtca
aatgctgatattagagcaaacgttttaagagggtgcaagctgagtgatacatttgttcat
ggagctgcacaaaggtctcacactgctgaagctgaaaatgttgatgatgtattagcaagg
ggagatgatgctgatattttagaatcttctggagctgtctctgatggaacactggaattt
gtgacagaaacagacaagaaaataggagagcatattcctcctgatttctttagtcagagg
aagttcttatcaggacctctcttgccaccagaggtaaaggagactatgaggcttttgtgg
aaaaatgaggctcggctatgctctcttatttgtgacattcagcatgagagattacatgtg
tctgggatgaatgcaaggcattcgatgttcttcactgaggctcttctcgttcctcctatc
aagtttcgccccccagccaagagtggtgattctgtgatggaacacccccaaactgtttta
ttagggaaggtattacaatccaatattgctttaggcaatgcacatgccaatagctcagac
cgctcaaagattattcctaggtggatggatcttcaacaaactgtgaacatattatatgat
agcaagacttcgggtcaaagagacaatacagctactggaatatgtcagctgctggaaaag
aaggagggaatctttcgccagaaaatgatgggaaagagggttaattatgcatgtcggtcc
gttatatctcctgatccttatttagcagtaaatgaaatagggattcctccctattttgca
ttaaggttaacctatccagagagggtaactccttggaatgttaacaaactgagggatgct
attattaatggtgctgagcatcatcctggagctactcactatgtagataaattggcaact
gttaagcttccaccaagccgaaaaatgcgtatgtctatttcaagaaagcttccttcctcg
aggggagctgttacacagcctgggaaaaatttagagtacgaatttgaaggcaaggttgtc
tatcgccatttgcaagatggtgatattgtgcttgtcaatcgacagcctacactccacaag
ccaagtataatggcacatgtagttcgtgttttgaaaggggagaaaacaatacgcatgcac
tatgctaattgcagtacatataatgctgattttgatggtgatgagatgaatgttcatttc
ccacaagatgaaatttcacgtgcagaagctttcaacattgtaaatgcaaataagcaatac
gttgttccaactagtggtcaacctatcagaggcttgattcaggatcatattataagcgct
gtacttcttacaaagagggatacatttttaacccgggatgagttcagtcagcttctatac
agctctggtgtctcagctactgcactaggatattttgtgggaaaaccaggccaaaagatt
tctaccataaattctgaagaggagttagaacctgtgctgcctgctatttggaaaccagaa
cccttatggacgggtaaacaggttattactgcagtgctaaatcatataaccagaggtcgt
acaccatttagtgttagaaaggctgggaaaactccggaagagtactttgggaaaacaagt
ggtgaatatgagttattaattcacaaaaacgagcttgtgcatggggttattgacaaagca
cagtttggtggttatggtttagttcatacagtgcaagagctttatggttcaaatgctgca
ggcgtcttgctttcagtgctaagccgcttatttaccatttttttgcagatgcacgggttt
acatgtggaatagatgatcttttaatagtacaccgttatgacttggaaaggatgaaaaaa
cttgataagaatgaacaaattggtgaatttgagcattggcagtttgttggttgtgcagat
ggtgataaagatcccattaagctgcaggtggagattgagaaggctatacgtaggaatggt
gactctgcagttactcgcttggatagacgaatgtctggtgctatgaataaattaacctct
gaagttaataagaatttatttcctgaggggttatgcaaaccctttccaaagaactgcctt
tctctcatgactgcaactggagctaaaggtggtatggttaattctacacaaatatgttct
ttattaggccaacaagagttggaaggcaaacgtgtccctcggatggtctctggcaaaacc
ttaccttgctttcctccttgggatcctgcgtcacgggctggaggctttattagtgatcgc
ttccttacaggtcttcgtcctcaagaatattattttcattgcatggctggtcgtgaaggg
ttggttgatacggctgtcaaaacatcccgcagtggatacctgcagagatgccttgtaaaa
aatctggagggtttaaaagtctgttatgattatactgttcgtgatgcagatggttctgtt
gtccaattcatttatggagaagatggtatagatgtccataagacaagctttcttgaggaa
tttgaggctttggctgcaaatcacaggattgttcaagaaagattcaacaatcaacttgac
agtgaagtcttgttcaaatatgattatattaagaaattgccagttgcacttgaaggtaaa
gcaaaagattatatagacaccctttcaaagaaaaagttgaagtcacttaatttaaggaag
cgaaaggacttcatgaagttaatgaggagcaagtacatttccagtcttgctcagcctgga
gaacctgtgggtgtggttgctgctcagtctgttggagagccatcaacccagatgacactc
aacactttccatcatgctggccgaggagaaatgaatgtcacactgggaatcccacgttta
caagagattctaatgagggcttcagagaaaatccagactccagttatgacctgccccttg
cgtaaggggaagacagaggatgatgctaagcgcctagctgcaaaattacagaaggtcact
gtagcagatgtgattgagagcatggaggttggtgtagtgccattctctgttaagaaacac
caagtttccactgtttataagctaaagctaaagctctatccacctgaactatatcctcca
tattcgggtataactttaaaagactgtcaagcaaccttgaaatttgtttttgttggggaa
atggaagatgcaatacaaagtcatctacttatgctgtcgaaaatcagaggcataacgaat
gtggtgcacagcacacagtcaaattctggagatggggcagatgaagatggtcctaccagc
aaatctcaagcagctgaagaaaatgatgatgctggtgatgatgatgattacgaagcacct
gatgatctaggtgcagatgcacagaaaagaaaaaggcaagctacagatgagatggattat
gaggatgatatggaaaatgaaatagttaacactgaaaatgggcgtagtgatatagaagcc
tcagctggatttgaaagcgaaattgatcaagctgaggttgaagccgggaatattatggat
ggtgaaattcaggtatttgatgctgaggatgaggcttctcagaccccatcacaacatggg
actgtctccaaatcaaaatcaagcggcggaaaagatgaagcagatgctagaggaatgaca
aggcgaacgaaaaaggacagtgacagagcattcttcatggtggctgaaggactggatttt
gaagtgcattttagatttaccaacgaaccccatattttactggctcagattgcccagaag
acagccaagaacgtttatgttaagaggtctggaaatattgaactgtgttcagtggttgtt
cctaagaaagcagatggcgaaccagaaattccagaattacagacttctggagtggacttc
ccaacattttggaacatgcaggatgaccttgacatcaggagattaaaatccaatgacatt
catgctgtactcaatacctatggagtagaagctgcccgagcaaccatcatagagcaggtg
aatcaggtcttcaagagttatgggattgctgttaacatccggcatctcagtcttattgct
gatttcatgacacagactggtggataccgcccaatgagcaggtttgggattgcagaaacc
atttcacctttcagcaagatgtcatatgagacagcatcgaggttcgtaattgaagcagca
tatcatggtgagatggacaatttggagtccccatctgccaggatttgccttggtctgcct
gttaaaatgggaacaggttgttttgacttgatgcaaaagataaacatttga
DBGET
integrated database retrieval system