KEGG   Nelumbo nucifera (sacred lotus): 104593926
Entry
104593926         CDS       T04131                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104593926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nnu03036]
    104593926
   03400 DNA repair and recombination proteins [BR:nnu03400]
    104593926
Chromosome and associated proteins [BR:nnu03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    104593926
DNA repair and recombination proteins [BR:nnu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     104593926
SSDB
Motif
Pfam: HhH-GPD LYRM2-like DUF4770
Other DBs
NCBI-GeneID: 104593926
NCBI-ProteinID: XP_010252323
UniProt: A0A1U7ZKU8
LinkDB
Position
Un
AA seq 538 aa
MKKRRKRQKSQQTVPPPQQSSSLASLDFETSTPEKLENPKARLLGSPTDDENHSKNKVSC
LDETVEEVEENGKEAVALEGEKSGSRRRRRSSDDEKQEKKKKKRRKGGRVVSSYFQKANK
GKEMEIDEVLCNSQCLSIDSKVRKDGKLDEKQGKRSKDRVGEQNLHNQIEGVEVSSSDSY
RTVKVEELQLEEEVDKIEDSAYRRRRVCHPLRKFQYSPTSPAGEDSKLDEEEEIDSTRSS
SNWMVDENVSTEAVRVTMFPPDSHATAKAERVQLEENMGIVEDSPSKRNSKGEKSQNRAN
KGVEVVSPYFQTSGMQETGTKDMEDLKIRTPKLRKKICSKVAVVSPYFHDAPKEEESDWS
DDEKKSKNPLSLSASQRLDEAYKRKTPDNTWKPPRSHFKLLQEEHAHDPWRVVVICMLLN
RTSGVQARRVISDLFALCPDAKAATLVATEAIENVIQTLGLQKKRAIMIQRFSKEYLEEG
WTHVTQLHGVGKYAADAYAIFCTGKWDRIRPTDHMLNKYWDFLWLLRKYCDTDLVNGE
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgaagaagaggaggaagagacagaaatcgcagcagacggtgccaccgcctcaacaatct
tcgtcattggcttcccttgatttcgagacgtcaacgcctgagaagctagaaaatcccaag
gcgcggttgttgggttctccgacggatgacgagaatcattcaaaaaacaaggtctcctgc
cttgatgagaccgttgaagaagtcgaggagaatgggaaagaggcagtggccctcgaggga
gaaaaatctggttcccggagaaggaggagaagcagtgatgatgagaaacaggagaagaag
aagaagaagaggagaaaaggagggcgggtggtttcgtcctatttccagaaggccaataaa
ggaaaggagatggagatcgatgaagttctttgcaattcccagtgcttgtcgatagattct
aaggttagaaaagatggaaagcttgatgagaaacaaggtaagaggagcaaggatagggtg
ggggaacagaatttgcataatcagattgagggagttgaggtgtcttcatccgattcttat
agaactgtgaaggtggaagaattgcaattggaggaggaggtggataaaatagaagattct
gcctacaggaggaggagagtgtgtcatcctctgcgcaaatttcagtactctccaacttca
cctgctggagaagacagcaaacttgacgaggaggaagagattgactcaacaaggagtagt
agtaactggatggttgatgagaatgtctctactgaggcagtgagggtaacaatgtttccc
cctgattcccatgctacagcgaaagcagaaagggtgcaactggaggagaatatgggaata
gttgaagattctccatcaaagaggaattcgaaaggagaaaagagtcagaacagagcaaac
aaaggagttgaagtggtttccccttacttccaaacctcagggatgcaagaaacagggacg
aaggatatggaggatttgaaaattagaacgccaaagctgcgtaagaagatttgttctaag
gtggcagtggtttctccttacttccatgatgctcccaaagaagaagagagtgactggtcg
gatgatgagaagaaatccaagaatccacttagcctttctgcttcccagagactggatgaa
gcatacaaaaggaaaactccagataacacatggaaacctccacggtcgcattttaaactt
ctccaagaagagcatgcccatgatccttggagggtagttgtgatatgcatgctccttaat
cgcacatccggtgtacaggctagaagagtaatatcagatctctttgcactgtgtcctgat
gcaaaggctgcaacattggttgctactgaagcaatagaaaacgtgattcagactctagga
ttgcagaagaaaagggcaatcatgattcaacgattctctaaggagtatttagaggaaggc
tggacacatgtgacccagttgcatggtgttgggaagtatgcagctgatgcttatgcaata
ttctgtacagggaagtgggacaggattaggcctactgaccatatgctgaacaaatactgg
gattttctttggttattaagaaaatactgtgatacagacttagtgaatggagaatga

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