Nelumbo nucifera (sacred lotus): 104594145
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Entry
104594145 CDS
T04131
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104594145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104594145
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
104594145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
104594145
NCBI-ProteinID:
XP_010252616
UniProt:
A0A1U7ZLK9
LinkDB
All DBs
Position
Un
AA seq
533 aa
AA seq
DB search
MSSDLLLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAENHGKCYECGVIVTRLIREYN
VRASSASDKSYFIGRFVTGVPNFSKKKNANNKWSLQKEGLQGRQVTDALREKYKNKPWLL
EDETGQQYHGQIEGAQSTAYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK
NRRKTADGYERWMMKVANNGPAAFGEVEKFDDKESGGGGGRGRRKATGDDDEGKVSDKGE
EDEEEEEARKTRLGLRKGGGDDDEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGND
PEEREDLAPEVPAPPEIKQDEEDEDEANEEEGGLSKSGKELKKLLGRAGGLNDSDAEDDD
DDEDVEDEFGLSPVLAPKKKDAPKEEPAESNPSKPLSSGTARGTPSTSKSAKAKRKSGGD
DGKVANGAPSKKGKFENESKSSLKDEPMSTSRCSAPQKALASSGSTAPTGPVTEDEIRAV
LLATSHLTTQDLVAKFKARLKLKEDKSAFAAIVRRISKIQKSNGSNWIVLRDK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagatctccttctaaagccgtcatgtagcggctgtgggtcgacgacggatctt
tacggaagcaattgcaagcacatgactctctgtttatcctgcgggaaggcaatggcagag
aaccatggaaaatgctatgagtgcggagttattgttacgcgattgatccgggagtacaat
gttcgtgcaagctctgctagtgataagagttacttcatcggtagattcgtcacaggagtt
ccaaatttttcaaagaagaaaaatgccaataataaatggtctctacagaaagaaggactc
caaggacgccaagttactgatgccttgcgggagaagtacaagaataagccttggcttttg
gaggatgagacgggccaacagtatcatggtcagattgagggtgcacaatcaacagcttat
tatctgctcatgatgcaagggaaggaatttgttgctatccctgctggttcttggtacaat
tttaataaagttgcccaatataagcaacttaccttagaagaagctgaagagaaaatgaag
aataggcggaaaactgcagatggatatgaaagatggatgatgaaagtggcaaataatggg
cctgctgcttttggtgaagtagagaagtttgatgacaaggaaagtggtgggggtggtggg
aggggacgtagaaaagcaactggtgatgatgacgaagggaaggtctcagataagggagag
gaagacgaggaagaagaggaggcaaggaaaactagacttggactaagaaaaggaggtggt
gatgatgatgaaggtcccagaggaggtgatcatgatttggatgatgatgatattgagaag
ggtgatgactgggagcatgaagaaattttcactgatgatgatgaagctgtgggtaatgat
cctgaggagcgagaagacttagctcctgaggttcctgcacctccggaaatcaaacaggat
gaagaggatgaagatgaagctaatgaggaagagggaggacttagcaaatctggaaaggaa
ctaaagaagctgcttggtagagcaggtgggctgaacgattcggatgctgaggatgatgat
gatgatgaagatgtggaagatgagtttggtctgtcccctgtattggctccaaagaagaag
gatgcaccaaaagaagaacctgctgagagcaacccctcaaaaccattatcttcagggact
gctcgaggaacaccttctacatccaagtcagcaaaggcaaagagaaaatctggtggggat
gatggaaaagttgctaatggtgcaccttcaaaaaaagggaagtttgaaaatgaatcaaaa
tcctctctgaaggatgagcccatgtccacttccagatgtagtgcaccccaaaaagcattg
gcatcatctggatcaacagcaccaactggtcctgtcactgaagatgaaatcagggcagta
ctgttggcaacaagccatttaacaacacaggatcttgttgctaaatttaaagcaagactg
aaattaaaggaggacaagtcagctttcgcagcaattgtgaggagaatctctaagatacaa
aagagcaacggatccaattggattgtgttgagagataaatga
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