Nelumbo nucifera (sacred lotus): 104594385
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Entry
104594385 CDS
T04131
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104594385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104594385
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104594385
mRNA degradation factors
5'-3' decay
Decapping complex
104594385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_EML_2
Beta-prop_RIG_2nd
RAP1
Motif
Other DBs
NCBI-GeneID:
104594385
NCBI-ProteinID:
XP_010252981
UniProt:
A0A822XQB9
A0A1U7ZGU7
LinkDB
All DBs
Position
Un
AA seq
1411 aa
AA seq
DB search
MASSGNPNQSAPFDMHKFFKPSSNPTPANPNTSTPPPFPPSSYPAPPSSSYPLPTGAFSY
PPPTPPFQHHYLHYPQDQFSNVHHQRPISYPTPPLQPPHLPSPNPNPGARLMALLGTNPP
SNIELPPPAVPSPSAALPSSGISEFPMSMNPPILPVIPSAPPLNPAMSPSTPMRLPSSKL
PKGRHLIGDHVVYDVDVRLQGEVQPQLEVTPITKYVSDPGLVVGRQIAVNRTYICYGLKL
GAIRVLNINTALRSLLRGHTQRVTDMAFFAEDVHLLASASIDGRVFVWKINEGPDEEDKP
QITGKIIVAIQIVGEGEPVHPRICWHCHKQEVLVVGIGKRVLRIDTTKVGKGEVFSAEEP
LRCPVDKLIDGVQLVGKHDGEVTELSMCQWMTTRLASASTDGTVKIWEDRKTLPLVVLRP
HDGQPVNSVTFVTAPHRPDHIILITAGPLNREVKMWASASEEGWLLPSDSESWKCTQTLD
LKSSDEPRLEEAFFNQVVALPRAGLLLLANAKKNAIYAVHIEYGPCPSASRMDYIAEFTV
TMPILSLTGTSDCLPDGEQVVQVYCVQTQAIQQYALDLSQCLPPPLENIGLEKTDSGVSR
ALEAPASDGFTLEPSLGSTSVESTVEGSTGPKPATLVSSTESAPASKYPVTPDSTEVHSL
HELTTPSMESKPTSLLATTSDADHIRVASPPLPLSPRLSGKLSGFRGPSNNYEPGPSLGD
RSGDQSVLDYSVDRRVDNVLPSLADVPSLDDTTRKDENKVAQNDISMVPNPPMMFKHPTH
LITPSEILSMAVSSSESTQVSQGMKRGESKVQDVVVNNDVESVEVEVKVVGETGPSQNDD
FNPQRETHIIVAEKREKSFCSQASDIGVEMARECHALSTETFNLEETRQVDDASVTEALD
RSSNAGEEEAQDSTKDVHGKVAESAAATIVPQSPAPATKGKKQKGKSSQVSGPSSPSPSP
FNSTDSSNEPGSSSSVPSTEAAFSQILAMQDMLNQLMAMQKEMQKQLPVVVAVPITKEGR
RLEAALGRSLEKVIKANTDALWARFQEENAKHEKLEREHLQQITNLITNSMNKDLPVLLE
RTLKKEITSIGPAVARAITPVVEKAISSAITESFQRGVGDKAVNQLEKSFSSKLEATLAR
QIQSQFQTSGKQALQDALRSNLETSVIPAFEMSCKAMFEQVDAAFQKGMGEHTTAAQKQF
ESAHSSLALTLRDAINSASSITQTLSGEFADGQRKLLALAAAGANSKAVNPLVTQLSNGP
LGGLHEMVEVPLDPTKELSRLLSERKYEEAFTAALQRSDVSIVSWLCSQVDFKSILSIVP
RPLSQGVLLSLVQQLACDISKETPRKLTWMTDAVIAINPTDSMIAMHVRPIFEQVYQILA
HHCTMPTVNAADAASIRVVMHVINSMLMSCK
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctccgggaatccaaatcaatccgcacccttcgatatgcacaagttcttcaaa
ccctcctcaaaccctacaccagcaaaccctaacacctcaactcccccaccgttccctccg
tcttcttaccctgcacctccttcttcatcctatcctctgcccaccggcgcattctcgtac
ccacccccaactcctccatttcagcaccattacctccactacccacaagaccagttctct
aacgtgcaccaccagaggcccatctcttatcccacaccccctctacagcctcctcatctc
ccttccccaaaccctaaccctggagccagactcatggccctactgggcactaacccaccc
agcaacatcgaattgccgcctccggcggtaccttctccctcggcggcattgccgtcttcg
ggcatttccgaatttccaatgtccatgaatccgccaatcttgcctgtgattccctcagcg
ccacccttgaatccggcgatgtccccatcgacgcctatgcggttgccgagcagcaagctc
cctaaggggcgtcatttaattggcgaccatgtggtgtatgacgtggacgttaggttgcag
ggcgaggttcagcctcagctcgaagttacaccaatcaccaagtatgtttctgatccggga
ctggttgtgggtcgtcagattgcggttaataggacttatatatgttatgggttgaagttg
ggggcgattcgggtccttaacatcaatactgcattgagatctttgcttcgaggtcacact
cagagggtcacggacatggctttctttgctgaggatgttcatcttttggccagtgcgagc
atagatggcagagtttttgtgtggaagattaatgaaggtccagatgaagaagataagcca
caaattacaggaaaaattattgttgcaattcagatagttggggagggggaaccagtacat
ccacgaatctgttggcactgtcacaaacaggaagtattggtagttggtattggaaaacgt
gtgctgagaattgatacaacaaaagttggaaaaggagaagtgttctctgcggaggaacct
cttagatgtcctgttgataagctgattgatggagtccagttggttggtaaacatgatgga
gaggttaccgagttatcgatgtgccaatggatgaccacccgtttagcttcagcatcaaca
gatggcacggtaaagatatgggaagaccgtaagacattaccccttgtggtactaaggcca
catgatgggcaaccagttaactcggttacattcgtaactgcccctcaccggccagatcac
attattctcatcacagcgggaccactgaaccgggaagtcaagatgtgggcatcagcaagt
gaagaaggctggctgttgcctagtgattctgaatcatggaagtgtactcagactcttgac
ttaaagagttctgacgaacctagacttgaggaggcattctttaatcaagtagtagcattg
ccacgtgcagggcttcttttacttgcaaatgctaagaagaatgctatatatgctgtacac
atagaatatggtccatgcccttcagcttcccgcatggattatattgctgagtttactgtc
accatgcctattctcagtcttactggaacaagtgattgcttacctgatggagaacaagtt
gttcaggtttactgtgttcaaacgcaggctattcaacagtatgctctggacttgtcccag
tgcttaccaccaccattggagaatattgggttagaaaagacagattcaggtgtttctcgt
gctctagaagcacctgcttcagatgggttcacactggagccatcgcttgggagtacatct
gttgaatcaactgtagaaggaagcacaggccccaaacctgccacactggtaagcagtact
gagagtgcacctgcttctaagtatcctgtgactccagattctactgaagttcatagcttg
catgaactgactactccgagtatggaatctaagccaacttccttactggcaacaacttct
gatgctgatcacatccgtgttgcctcaccaccacttcctttgagtcctaggctgtctgga
aaactgtctggttttagaggtccatctaataactatgagcctggtccctctcttggtgat
cgtagtggagaccagtcagttcttgattattcagttgataggagagtggataatgttctt
ccaagtttggccgatgttccttccttggatgacactaccaggaaggacgaaaataaagtt
gcacaaaatgatatttctatggtacctaatcctccaatgatgttcaaacatcctacccat
ttgattactccttctgagattctatcaatggctgtttcatcttctgagagtacacaggtc
agtcaaggcatgaaaaggggagagtcaaaggttcaagacgtggttgtcaacaatgatgtg
gagagtgttgaggtggaggttaaagttgttggtgaaactggacctagtcagaacgacgat
tttaaccctcagagagaaacccacattattgttgcagagaaaagggagaagtccttttgc
tcccaggcttctgatattggtgttgaaatggctagagagtgtcatgctttgtccactgaa
acttttaacttggaggaaactcgacaagttgatgatgctagtgttactgaagccttggac
cgaagttcaaatgctggtgaggaagaggcccaagattccacaaaggatgtgcatggaaaa
gttgctgaatcggctgcagctacaatcgttccacagtccccagcaccggctacaaaaggc
aaaaaacagaagggaaaaagctctcaagtttctggtccatcttccccatctccaagtcct
ttcaattctacagattcttctaatgaacctggtagcagttcaagcgttccttctacagag
gctgccttttctcagattctggctatgcaggatatgctgaaccagctaatggccatgcag
aaggaaatgcagaaacagctcccggtggtggtggctgtgccaattactaaagaaggcaga
agacttgaggcagcccttggcaggagtttggagaaagttattaaagccaacactgatgct
ctatgggctcgtttccaggaggagaatgcaaaacatgagaagctagaacgggagcatcta
cagcagataaccaatttgatcaccaactctatgaacaaagatttgccagttcttctagaa
agaacattgaagaaggaaataacttcaataggaccagctgtagctcgtgctattacccca
gttgtggagaaagcaatttcttcagctataaccgagtcattccagagaggggtaggagat
aaggcagtgaatcagctagaaaagtcatttagttcaaaacttgaagctacattggccaga
cagatccaatcacaatttcaaacttcgggcaagcaagctcttcaggatgcattaaggtct
aatttggaaacttcagttattccagcttttgagatgtcttgcaaagccatgtttgagcaa
gttgatgctgcattccagaaaggaatgggtgaacatacaactgcagctcaaaagcagttt
gagtctgcacattcctcattggcacttactttgagggatgctattaattcagcttcatca
atcacccaaaccctaagtggggaatttgctgatggccagcgcaagctcttagctcttgca
gctgcgggggctaactcaaaagctgtaaatcctttggttacgcaattaagcaatggacct
ttgggtggtctgcacgagatggttgaagtgccattggatccaaccaaagaactctcaagg
ttgctatctgagcgcaaatatgaggaagctttcactgcagcactgcaaagaagtgatgtc
tctatagtgtcctggttatgttctcaggttgattttaagagtatattgtcgattgtgcct
cgtcctttgagccaaggagttctgctttctcttgttcagcagttggcctgtgatatcagc
aaagagacccctcggaagctgacatggatgacggatgcggttattgccatcaacccaacg
gattcaatgatcgcaatgcatgtaaggcccatcttcgagcaggtctatcagatactagcc
catcactgcaccatgcccactgtaaatgctgccgatgctgcaagcattagagttgtcatg
cacgtcatcaactccatgttgatgagctgtaaatga
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integrated database retrieval system
