Nelumbo nucifera (sacred lotus): 104594884
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Entry
104594884 CDS
T04131
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104594884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104594884
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104594884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PvlArgDC
Motif
Other DBs
NCBI-GeneID:
104594884
NCBI-ProteinID:
XP_010253724
UniProt:
A0A822Y170
A0A1U7ZPE2
LinkDB
All DBs
Position
Un
AA seq
254 aa
AA seq
DB search
MSGKTATAPTTYSPSPTQKKRQPIFKDVDWIRPDGRGFHQCRPAFLRTGAVNAAAGSAYA
EFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHKAL
EGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVTSVSVSCLGA
NLVIDPISEEESYQDGSLLITCMPSRNEVTQLTLTGEWSTPKIHEAVELCLDACSKLGDV
MRSCLKEAASASQE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaagactgcgacggctcctacgacgtactcgccgtctccgactcagaaaaag
cggcaacccattttcaaagatgtcgactggattcgtcctgatggtcgaggctttcatcag
tgcaggcctgcatttttgagaactggtgctgtgaatgctgccgcaggatctgcttatgcg
gagtttggaaatactaaggttattgtgtccgtatttggtccaagagaaagtaagaaagca
atgatgtacagtgatataggccggctgaattgcaatgtcagctatacaacttttgctact
ccagttcgtggacagggatcagatcacaaagagttttcctcaatgcttcataaagccttg
gaaggggctataatccttgagagtttcccaaagacaactgtagatgtttttgcattggtt
ttggaatctggtggaagtgatcttccagttgtgatatcatgtgcaagtcttgccctagct
gatgcagggataatgatgtatgacttggttacttctgtttctgtgtcttgtctcggggca
aatcttgtcatagatcctatatcagaggaggagagctaccaggatggaagccttttgata
acatgtatgccttcccgtaatgaggtcactcagttgaccctcactggagaatggtccaca
ccgaagattcatgaggcagtggagctgtgtcttgacgcttgctcgaaacttggggatgtc
atgagatcgtgtttaaaagaagctgcttctgcatcacaggaatag
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