Nelumbo nucifera (sacred lotus): 104595338
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Entry
104595338 CDS
T04131
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104595338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnu03009
]
104595338
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104595338
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WDR55
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40
Beta-prop_EML
WDR90_beta-prop_4th
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EMC1_N
Beta-prop_ACSF4
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
PQQ_2
NBCH_WD40
Beta-prop_VPS8
RMC1_N
Hira
Ge1_WD40
Beta-prop_Nup120_160
TruB_C
PEP5_VPS11_N
CFAP251_N
Motif
Other DBs
NCBI-GeneID:
104595338
NCBI-ProteinID:
XP_010254337
UniProt:
A0A1U7ZK21
A0A822Y491
LinkDB
All DBs
Position
Un
AA seq
635 aa
AA seq
DB search
MVSHNLKSVHAAFTPDGDFLAILSPDGVVKIWNTSNGNLFAEFKEQDEESDRCYSCLACI
FIGKKRRKGSGTILLALGTTTGNILAFNVSTGEKKWTSAECHPGGTLGLYFLNGGNALLC
VGADGVASEVDPQTGELMRKFKASKKSISSLSLSSDEKVLAVASSKIRVFNLENGKELQK
FPFDLDSVQYMAVSDGAKAIVTSGFGDKQLQVWHCDSSTTDGTTGPTLSMKNPPFMLECK
NSSEDKDGLVVLSVTESGIAYLWDLKTISQDKVSPTKIMVKSIKAKADRQKSGSAKKGRI
PVISARLKALEMDKPISILIAYGSIDCPHFNVLEITNPGEDIIVTAGDMMSRTIAGSLQE
NEDLGGKENSAPSIQKLESKAADEPMQKKKVNKKRAAPDQDIITTGNTFGFEAMDGIRVD
DDLTEPTMGEKLASLNLIDNDKANGLEKQEPSFGTNLPSADSVHVLLKQALHADDRALLL
DCLYNQDEKVIANSTSLLNPSDVLKLLDFLMPIIQSRGAVLACALPWLRSLLLQHASSIM
SQESSFFALNSLYQLIESRVSTFQSALQLSSCLDYCFAGILEDMADEESTMKPIIYEDKD
ESEEEEPEDDMETDEDVSEAIIGFSDFEGSDGMSD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtgagccataacttgaaatctgtccacgctgctttcactcccgacggtgatttcctc
gccatattatctccagatggggttgttaaaatctggaacacaagcaatggaaatttgttc
gcagagtttaaagagcaagatgaagaatctgaccgttgttattcttgtttggcatgtatc
ttcattgggaaaaagcgtagaaaaggctctggtacaatcttacttgctctaggcacaact
actggcaacattttggcctttaatgtttccactggtgagaagaagtggacatctgctgaa
tgccaccctggtggaactttgggtctctattttctaaatggaggcaatgcccttctctgt
gttggtgctgatggagtggcatctgaagtggatccccaaactggagaacttatgagaaaa
ttcaaggcctcaaaaaagtccatatcatcgttgtctctttcttctgatgagaaagttcta
gctgtagcatcttctaagatacgggtatttaacttagaaaatgggaaagagcttcagaag
tttccctttgatctggattctgttcaatatatggctgtttctgatggtgccaaggccatt
gttacttcaggatttggggataagcagcttcaagtgtggcactgtgattccagcaccaca
gatggaactaccgggcccaccctttctatgaaaaatcctccatttatgttagaatgcaaa
aattcttccgaggacaaagatggtttggttgtcctatcagttacagagtctggtattgct
tacttgtgggatttaaagaccatttcacaagacaaggttagccctacaaagatcatggtc
aagtctatcaaagcaaaagctgaccgacaaaagagtggaagtgccaagaagggtcgtatt
cctgtcatatctgctagattgaaagctttagagatggataagccaatttctatccttatt
gcatatggttccatagactgtccacattttaatgtattggagattactaacccaggggag
gatattattgttactgctggagatatgatgtcaagaactatagctggcagtcttcaagaa
aatgaagatcttggaggtaaagaaaattctgctccgagtatccagaagctggagtcaaaa
gcagcagatgaaccaatgcagaagaaaaaagtaaataagaaaagggctgcaccagatcaa
gacattataactacagggaacacatttggttttgaggctatggatgggatccgtgttgat
gatgatttaactgagccaaccatgggtgagaagcttgcaagtctaaatttgattgataat
gataaggccaatggccttgaaaaacaagaaccttcttttggaacaaatctcccaagtgca
gattcagttcatgtgttgctcaagcaagcacttcatgctgatgatcgtgcacttctctta
gattgtttgtacaaccaagatgaaaaggttattgcaaattcaacctcattgttaaatcca
tctgatgttctcaagcttttggacttcctgatgcctatcatacagtcgaggggtgcagtt
ttggcttgtgctcttccatggcttagaagtctacttcttcagcatgcaagcagtataatg
tcccaggagtcttcgttttttgcactcaactctctataccagctcattgaatctagagtc
tcaacctttcagtcagctcttcaactatcaagctgcttagactactgttttgcagggatt
ttggaagatatggctgatgaagaaagcacaatgaaacccatcatttatgaagataaggat
gaaagcgaagaagaggaacctgaagatgatatggaaactgatgaagatgtcagtgaagct
atcattggttttagtgattttgaaggaagtgatggcatgagtgattaa
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