KEGG   Nelumbo nucifera (sacred lotus): 104595338
Entry
104595338         CDS       T04131                                 
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104595338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nnu03009]
    104595338
Ribosome biogenesis [BR:nnu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104595338
SSDB
Motif
Pfam: Utp12 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WDR55 ANAPC4_WD40 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WD40 Beta-prop_EML WDR90_beta-prop_4th WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EMC1_N Beta-prop_ACSF4 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_1st PQQ_2 NBCH_WD40 Beta-prop_VPS8 RMC1_N Hira Ge1_WD40 Beta-prop_Nup120_160 TruB_C PEP5_VPS11_N CFAP251_N
Other DBs
NCBI-GeneID: 104595338
NCBI-ProteinID: XP_010254337
UniProt: A0A1U7ZK21 A0A822Y491
LinkDB
Position
Un
AA seq 635 aa
MVSHNLKSVHAAFTPDGDFLAILSPDGVVKIWNTSNGNLFAEFKEQDEESDRCYSCLACI
FIGKKRRKGSGTILLALGTTTGNILAFNVSTGEKKWTSAECHPGGTLGLYFLNGGNALLC
VGADGVASEVDPQTGELMRKFKASKKSISSLSLSSDEKVLAVASSKIRVFNLENGKELQK
FPFDLDSVQYMAVSDGAKAIVTSGFGDKQLQVWHCDSSTTDGTTGPTLSMKNPPFMLECK
NSSEDKDGLVVLSVTESGIAYLWDLKTISQDKVSPTKIMVKSIKAKADRQKSGSAKKGRI
PVISARLKALEMDKPISILIAYGSIDCPHFNVLEITNPGEDIIVTAGDMMSRTIAGSLQE
NEDLGGKENSAPSIQKLESKAADEPMQKKKVNKKRAAPDQDIITTGNTFGFEAMDGIRVD
DDLTEPTMGEKLASLNLIDNDKANGLEKQEPSFGTNLPSADSVHVLLKQALHADDRALLL
DCLYNQDEKVIANSTSLLNPSDVLKLLDFLMPIIQSRGAVLACALPWLRSLLLQHASSIM
SQESSFFALNSLYQLIESRVSTFQSALQLSSCLDYCFAGILEDMADEESTMKPIIYEDKD
ESEEEEPEDDMETDEDVSEAIIGFSDFEGSDGMSD
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggtgagccataacttgaaatctgtccacgctgctttcactcccgacggtgatttcctc
gccatattatctccagatggggttgttaaaatctggaacacaagcaatggaaatttgttc
gcagagtttaaagagcaagatgaagaatctgaccgttgttattcttgtttggcatgtatc
ttcattgggaaaaagcgtagaaaaggctctggtacaatcttacttgctctaggcacaact
actggcaacattttggcctttaatgtttccactggtgagaagaagtggacatctgctgaa
tgccaccctggtggaactttgggtctctattttctaaatggaggcaatgcccttctctgt
gttggtgctgatggagtggcatctgaagtggatccccaaactggagaacttatgagaaaa
ttcaaggcctcaaaaaagtccatatcatcgttgtctctttcttctgatgagaaagttcta
gctgtagcatcttctaagatacgggtatttaacttagaaaatgggaaagagcttcagaag
tttccctttgatctggattctgttcaatatatggctgtttctgatggtgccaaggccatt
gttacttcaggatttggggataagcagcttcaagtgtggcactgtgattccagcaccaca
gatggaactaccgggcccaccctttctatgaaaaatcctccatttatgttagaatgcaaa
aattcttccgaggacaaagatggtttggttgtcctatcagttacagagtctggtattgct
tacttgtgggatttaaagaccatttcacaagacaaggttagccctacaaagatcatggtc
aagtctatcaaagcaaaagctgaccgacaaaagagtggaagtgccaagaagggtcgtatt
cctgtcatatctgctagattgaaagctttagagatggataagccaatttctatccttatt
gcatatggttccatagactgtccacattttaatgtattggagattactaacccaggggag
gatattattgttactgctggagatatgatgtcaagaactatagctggcagtcttcaagaa
aatgaagatcttggaggtaaagaaaattctgctccgagtatccagaagctggagtcaaaa
gcagcagatgaaccaatgcagaagaaaaaagtaaataagaaaagggctgcaccagatcaa
gacattataactacagggaacacatttggttttgaggctatggatgggatccgtgttgat
gatgatttaactgagccaaccatgggtgagaagcttgcaagtctaaatttgattgataat
gataaggccaatggccttgaaaaacaagaaccttcttttggaacaaatctcccaagtgca
gattcagttcatgtgttgctcaagcaagcacttcatgctgatgatcgtgcacttctctta
gattgtttgtacaaccaagatgaaaaggttattgcaaattcaacctcattgttaaatcca
tctgatgttctcaagcttttggacttcctgatgcctatcatacagtcgaggggtgcagtt
ttggcttgtgctcttccatggcttagaagtctacttcttcagcatgcaagcagtataatg
tcccaggagtcttcgttttttgcactcaactctctataccagctcattgaatctagagtc
tcaacctttcagtcagctcttcaactatcaagctgcttagactactgttttgcagggatt
ttggaagatatggctgatgaagaaagcacaatgaaacccatcatttatgaagataaggat
gaaagcgaagaagaggaacctgaagatgatatggaaactgatgaagatgtcagtgaagct
atcattggttttagtgattttgaaggaagtgatggcatgagtgattaa

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