KEGG   Nelumbo nucifera (sacred lotus): 104595741
Entry
104595741         CDS       T04131                                 
Name
(RefSeq) splicing factor U2af large subunit B
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104595741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nnu03041]
    104595741
Spliceosome [BR:nnu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104595741
 Complex B
    104595741
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 104595741
NCBI-ProteinID: XP_010254909
UniProt: A0A1U7ZNK7
LinkDB
Position
Un
AA seq 559 aa
MPDYAERYEGNGEGLNDYSSSPQQRPSSHGAPDDYSDSKSQHGSRDYERETSKSRERERE
KGRDKDRERDGSKDRERDRERERDRDRDRDRHHRDHHRERSDRRDRGRDRDDDDNYHRSR
DHDRRRDYDRDREGRRRHRSQSRSQGRSDHRSRSRSRSRSKSKRISGFDMAPPSTAMLVA
AAGQVPGTTPAIPGMFPNMFPLPGQFGVPVMPVQAMTQQATRHARRVYVGGLPPTANEQS
VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRVFVGGLPYYFTEAQ
IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR
ANQGASQPKPEQENVLLQAQQQVALQRLVFQGGALPTKVVCLTQIVGADELKDDEEYEDI
MEDMKGEGGKYGTLVNVVIPRPNPNGEPSPGVGKVFLEYADVDGSAKARQGLNGRKFGGN
QVEAVFYPEYKFHEGDYDG
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgccggactatgctgaaagatacgagggtaatggagaggggttgaacgattacagctct
tcacctcaacagagacccagtagccacggcgctcccgacgattacagcgattccaaatct
cagcatggttctcgtgattatgagagggagacttcaaaaagcagagaacgggaaagagaa
aaagggagggataaggacagggagagggatggatccaaggacagggagagagatcgtgaa
agggaacgggacagagatcgtgatcgtgatcggcatcatagagatcatcacagagaacga
agtgatagaagggatcgaggacgggatagagatgatgatgacaactatcatcgtagtcga
gaccatgataggcgcagagattatgatagagatagagagggacgccgcaggcataggtct
caatctcgttctcagggtagatctgatcatagatcaagatctcgatctcgttcaagatca
aagagcaagcggatcagtggttttgacatggcacctccttcaactgcaatgcttgtggct
gctgcaggtcaggtgcctgggaccactccagcaattcctgggatgtttccaaacatgttc
cccttgccaggacagtttggagtccctgttatgccagttcaggctatgacacaacaggct
acaagacatgctcgccgggtgtatgttggtggtcttccacctacggctaatgaacagtct
gtagcaaccttcttcagccaggttatggccgcaattggagggaatactgctgggccaggg
gatgctgttgttaatgtatacatcaaccatgaaaagaagtttgcctttgtggagatgaga
tcagttgaggaagccagcaatgctatggccttggatggtataatttttgagggtgctcct
gttaaggtgaggaggccaagtgattataacccttctcttgctgcaacacttggcccaagt
caaccaaatcctaatttgaaccttgctgctgttgggttgacacctggttctgctggtggg
cttgagggacctgatcgcgtttttgtgggtggtctcccatactacttcacagaagcacag
ataagagagctattagaatcatttgggcctcttcgaggttttgatcttgtgaaggacagg
gaaacaggaaattcaaaaggatatgccttttgtgtctaccaggacctctcagttactgac
attgcttgtgcggctctgaatggaataaaaatgggagataaaactctcactgtaagacgt
gcaaatcagggtgcttcccagcccaaacctgagcaggagaatgtactgttacaggcacaa
cagcaggtggccttgcagagacttgtgtttcaaggtggtgcacttcctacgaaggttgtc
tgcttgacacagatagttggtgcagatgaactcaaagatgacgaggagtatgaagacatt
atggaagatatgaaaggagaaggcggaaaatatggtacgctggtgaatgttgtcatcccg
cgcccgaacccaaatggtgaaccatcacctggagttggaaaggtgttcttggagtatgct
gatgttgatggatcagcaaaggctaggcaaggactgaatggcaggaaatttggtggaaat
caagttgaggctgttttttatccagaatataagttccatgagggggattatgatggttag

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