Nelumbo nucifera (sacred lotus): 104596011
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Entry
104596011 CDS
T04131
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104596011
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nnu01009
]
104596011
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104596011
Protein phosphatases and associated proteins [BR:
nnu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104596011
Spliceosome [BR:
nnu03041
]
Common components
Common spliceosomal components
SR proteins
104596011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
104596011
NCBI-ProteinID:
XP_010255285
UniProt:
A0A1U7ZPJ2
LinkDB
All DBs
Position
Un
AA seq
206 aa
AA seq
DB search
MSYSREGRSTSPSRSPSPHRGHRSRSLSRSRGRSRSRSQDSGDAANPGNNLYVTGLSTRV
TTNDLEKYFSREGKVVECHLVTDPRTRESRGFGFVTMETLEDADRCIKYLDRSVLEGRLI
TVQKAKRSRGRTPTPGRYHGLMDRRGRGRRRSRSYSPRKRQDRDYRRGRSRSRSPYGRRG
DDYPDLHRRRRERSLSAGSDGNHRAG
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcatattcaagagagggaaggtctacctctccctcccgctccccctcaccccataga
ggtcataggtcaagatcattgtcaaggtcaagggggaggagtcgctccaggagccaagat
tctggagatgcagccaatcccggaaataacttgtatgttacaggcttatctacaagggtt
actaccaatgatcttgagaaatattttagccgtgaaggaaaggttgtggaatgccatctt
gtgactgatcctcgtacaagagaatctcgtggatttggatttgtaacaatggaaactctt
gaggatgctgaccgctgtatcaaatatctagaccgttctgtgcttgaaggtcgattaatc
acagttcaaaaggcaaaacggagtcgtgggaggacaccaactccaggcagataccatggt
ctgatggaccgaagagggcgtggtcgcagacggtctcgtagctattcacctcgcaagcgg
caggacagagattataggcgaggaagatcaagatctcgctctccatatggaaggagggga
gatgattacccggacctgcataggaggcgtagagaacgctctttatcagctggcagcgac
ggaaatcacagggcaggttaa
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