Nelumbo nucifera (sacred lotus): 104596129
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Entry
104596129 CDS
T04131
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104596129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nnu04131
]
104596129
Membrane trafficking [BR:
nnu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104596129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
Vps39_1
CNH
TPR_Vps41
TPR_PEP5_VPS11
Motif
Other DBs
NCBI-GeneID:
104596129
NCBI-ProteinID:
XP_010255459
UniProt:
A0A1U8A1G9
LinkDB
All DBs
Position
Un
AA seq
1059 aa
AA seq
DB search
MNLDCHSPLSIIRRGGVVFSSSPNPNILASMEKLEPKSRTVLEAVAEFDSSKASTLPPST
TRPFRSLAISTISDSQTLIYIGTARGKIILLSLNPSSVDIRDSVPISVDENGTKQENSTG
SNVSSSKGLSFLRSTSISDCPVDSIHVLVEVQKILVVSDGFIFLLDLFLLQPGRRLSFPK
GATVVARRFRSGDSTSSDLLRDGIPRSELSSAGQRFLQKLGGGIRTNGMKTREPESLGEG
NCLVAVAVGKRLILIELLLSGRTDRIDRDADMGGVFMVLKEIHGIEGIKTMVWLDDSIIV
GTGNGYTLFSCITGQSAPMFSLPDSSSPPCLKCLLKDHNVLLFVDNVGIIVNAFGQPVGG
SLVFRNLPDSVGEISSHVIVVKGGRMDLYHKRTSLCIQSLSFAGEGVGPCLVANEESRTG
ELVVVATPSKAICYRKVSAEEQIKDLLRKKNFKDAISLVEELECDGEMTKEMLSFVHAQV
GFLLLFDLHFEEAINHFLLSETMEPSEVFPFIMRDPNRWSLLVPRKRYWSLHPPPLPLED
VIDDGLMAIQRAGFLRKAGVETATNEDFLLNPPSRAYLLESAIQYMIRYLQVSREKDLTP
SVKEGVDTLLMYLYRALNRVDDMEQLASSENSCVVEELETLLDDPGHLRTLAFLYASKGM
SSKALAIWRVLARNYSSGLWKDTVVEDETSDTCKNVISGKKTAAIEATKLLEESSDEDMV
LQHLGWVADVDQGLAVRILTSDKRANQLAPDKVIAAIDPKKVEILQRYLQWLIEDQDSYD
TRFHTLYALSLAKSAIEAVEMEINQQTLDTATSEKTNISDVEIGSIFHNSVRERLQFFLQ
SSDLYDPEEVLDLVESSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYCAEIGRP
DAYMQLLDMYLDPQDGKEPMFKAAVRLLHNHGESLDPLQVLERLSPDMPLQLASDTILRM
LRARVHHHLQGQIVHNLSRAIDIDTRLSRLEERSRHVQINDESLCDSCHSRLGTKLFAMY
PDDSIVCYKCFRRQGESTSVTGRNFKRDIIFKPGWLVNR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggactgccattcccctctctcgataattcgaagagggggagttgttttcagt
tcatctcctaacccgaacatcttagcttcgatggagaagcttgaacccaagtctcgaacg
gtgctggaagctgttgcagagttcgattcatcaaaggcctcaactttgcctccgtccacc
actcgtccttttcgatctctagcaatttcgacgatatccgattctcaaacactaatttat
atcggtactgcaagaggaaagatcattctactctccctaaacccttcttctgttgatatt
cgtgattccgttcctatctcggttgatgaaaacgggactaaacaagaaaattccactggc
tctaatgtttcttcttccaaaggtttatcctttttgagatcaacatcgattagtgattgc
ccagtggattcaattcatgtactcgtcgaagtacagaaaattctggtagtttcggatgga
tttatatttttgcttgatctgtttctgttacaacccggtcggagattgagttttcctaaa
ggagcaactgttgttgccagaagatttcgttctggtgattcaacgagttcagatctactt
agggatggcattcctcggtccgagttatctagcgccggtcagcggtttcttcagaagcta
ggaggagggattaggacaaatggtatgaaaactagagagcctgaatctctgggagaaggt
aattgtcttgtcgccgttgcagttggcaaaaggttgattttgatagagctcctcttgtct
ggcagaactgataggatagacagggatgcggatatggggggtgttttcatggttttgaaa
gaaatccatggtatcgagggaatcaagaccatggtgtggcttgatgactcaataattgtc
ggtactggtaatgggtatactttattttcttgcattactgggcaaagtgctcctatgttt
tcccttccggattcatccagtcctccatgtcttaaatgtctattgaaagaccataatgtg
cttctgttcgttgataatgttgggatcattgtcaatgcttttggacagccggttggaggg
agtttagttttccgaaatcttccagattctgttggggagatatcttcccatgtgatagtt
gtaaagggtggaaggatggacttataccacaagagaactagtctctgcattcagtcactt
tcttttgcaggggaaggagttgggccttgtcttgtcgcaaatgaggagagcagaacaggg
gaacttgttgttgttgcaacaccttctaaggccatttgttatcggaaagtatctgctgaa
gaacaaataaaagacctattgaggaagaagaattttaaggatgccatctctttagtagaa
gaacttgagtgtgatggtgaaatgacaaaggaaatgctttcttttgtgcatgctcaagtg
gggtttctcttgttatttgatttgcattttgaggaagccataaaccattttttgctgtcg
gaaacgatggaaccttctgaagtatttccatttataatgcgggatccaaatcgctggtca
ctgctggtccccaggaagcggtactggagcttgcatccaccgcctttacctcttgaagat
gttatagatgatgggttaatggctattcaaagagctggatttcttaggaaggcaggtgta
gagactgcaactaatgaagattttcttttgaatccaccaagtagagcatatctattggag
tcagcaatccagtacatgatcaggtatctacaagtttctcgggagaaggatttgacacca
tcagtgaaagagggtgttgacactcttcttatgtatctctatagagcccttaatcgtgta
gatgacatggaacagttggcgtcttcagagaatagttgtgtagtggaagagttggagact
ctattagatgatcctgggcatttaaggacacttgctttcttgtatgcaagtaaagggatg
agttcaaaagctcttgcaatttggcgtgttttggcaagaaattattcttctggcctatgg
aaagacactgtagttgaagatgaaacttcagatacctgcaagaatgttatctctggtaag
aagactgctgcaatagaagcaacaaaacttcttgaggagtcatctgatgaagacatggtt
ctgcaacatcttggatgggttgcagacgtggaccaggggcttgctgttagaattttaaca
tcagataaaagagccaatcagcttgcacctgacaaagttattgctgccattgatcctaaa
aaggtggagattcttcagaggtatttgcaatggttgattgaggatcaagactcttatgat
actcgattccatactttatatgctctttcacttgccaaatcagctattgaagctgtagaa
atggaaatcaatcaacaaaccctggacactgcaacatcagaaaagacaaatatttctgat
gttgagattggttcaatctttcataattcagtcagagagagactgcagtttttcctacag
tcctcagacttgtatgatccagaagaagtccttgacttggtcgaaagttcagagttatgg
ctcgaaaaggctattctttacaggaaacttgggcaagagacattggtgctccaaattttg
gctttgaagctggaggacagtgaagcagctgaacaatattgtgcagaaattggtagacct
gatgcctatatgcagctacttgatatgtatttggatccccaagacgggaaggagcctatg
tttaaggctgctgttcgccttcttcacaatcatggagaatctttggatccactgcaagtt
ctggagagattgtcaccagatatgcctttacaactagcatcagatacaatattgagaatg
ctgagagctcgagttcatcatcatctccaaggacaaattgtacacaatctttcccgcgcc
atagacatagatacaaggctatcaagattggaggagagatcaaggcatgtccagattaat
gatgagagcctgtgtgattcctgtcattcccgccttggcacaaagctatttgcaatgtat
ccagatgattctattgtttgttacaagtgttttcgtcgtcagggtgagtccacatcagtc
acaggacgtaacttcaagcgagatatcatattcaaaccaggttggcttgttaacagataa
DBGET
integrated database retrieval system