KEGG   Nelumbo nucifera (sacred lotus): 104596129
Entry
104596129         CDS       T04131                                 
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
  KO
K20177  vacuolar protein sorting-associated protein 3
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104596129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nnu04131]
    104596129
Membrane trafficking [BR:nnu04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    104596129
SSDB
Motif
Pfam: zf-Vps39_C Clathrin Vps39_1 CNH TPR_Vps41 TPR_PEP5_VPS11
Other DBs
NCBI-GeneID: 104596129
NCBI-ProteinID: XP_010255459
UniProt: A0A1U8A1G9
LinkDB
Position
Un
AA seq 1059 aa
MNLDCHSPLSIIRRGGVVFSSSPNPNILASMEKLEPKSRTVLEAVAEFDSSKASTLPPST
TRPFRSLAISTISDSQTLIYIGTARGKIILLSLNPSSVDIRDSVPISVDENGTKQENSTG
SNVSSSKGLSFLRSTSISDCPVDSIHVLVEVQKILVVSDGFIFLLDLFLLQPGRRLSFPK
GATVVARRFRSGDSTSSDLLRDGIPRSELSSAGQRFLQKLGGGIRTNGMKTREPESLGEG
NCLVAVAVGKRLILIELLLSGRTDRIDRDADMGGVFMVLKEIHGIEGIKTMVWLDDSIIV
GTGNGYTLFSCITGQSAPMFSLPDSSSPPCLKCLLKDHNVLLFVDNVGIIVNAFGQPVGG
SLVFRNLPDSVGEISSHVIVVKGGRMDLYHKRTSLCIQSLSFAGEGVGPCLVANEESRTG
ELVVVATPSKAICYRKVSAEEQIKDLLRKKNFKDAISLVEELECDGEMTKEMLSFVHAQV
GFLLLFDLHFEEAINHFLLSETMEPSEVFPFIMRDPNRWSLLVPRKRYWSLHPPPLPLED
VIDDGLMAIQRAGFLRKAGVETATNEDFLLNPPSRAYLLESAIQYMIRYLQVSREKDLTP
SVKEGVDTLLMYLYRALNRVDDMEQLASSENSCVVEELETLLDDPGHLRTLAFLYASKGM
SSKALAIWRVLARNYSSGLWKDTVVEDETSDTCKNVISGKKTAAIEATKLLEESSDEDMV
LQHLGWVADVDQGLAVRILTSDKRANQLAPDKVIAAIDPKKVEILQRYLQWLIEDQDSYD
TRFHTLYALSLAKSAIEAVEMEINQQTLDTATSEKTNISDVEIGSIFHNSVRERLQFFLQ
SSDLYDPEEVLDLVESSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYCAEIGRP
DAYMQLLDMYLDPQDGKEPMFKAAVRLLHNHGESLDPLQVLERLSPDMPLQLASDTILRM
LRARVHHHLQGQIVHNLSRAIDIDTRLSRLEERSRHVQINDESLCDSCHSRLGTKLFAMY
PDDSIVCYKCFRRQGESTSVTGRNFKRDIIFKPGWLVNR
NT seq 3180 nt   +upstreamnt  +downstreamnt
atgaatttggactgccattcccctctctcgataattcgaagagggggagttgttttcagt
tcatctcctaacccgaacatcttagcttcgatggagaagcttgaacccaagtctcgaacg
gtgctggaagctgttgcagagttcgattcatcaaaggcctcaactttgcctccgtccacc
actcgtccttttcgatctctagcaatttcgacgatatccgattctcaaacactaatttat
atcggtactgcaagaggaaagatcattctactctccctaaacccttcttctgttgatatt
cgtgattccgttcctatctcggttgatgaaaacgggactaaacaagaaaattccactggc
tctaatgtttcttcttccaaaggtttatcctttttgagatcaacatcgattagtgattgc
ccagtggattcaattcatgtactcgtcgaagtacagaaaattctggtagtttcggatgga
tttatatttttgcttgatctgtttctgttacaacccggtcggagattgagttttcctaaa
ggagcaactgttgttgccagaagatttcgttctggtgattcaacgagttcagatctactt
agggatggcattcctcggtccgagttatctagcgccggtcagcggtttcttcagaagcta
ggaggagggattaggacaaatggtatgaaaactagagagcctgaatctctgggagaaggt
aattgtcttgtcgccgttgcagttggcaaaaggttgattttgatagagctcctcttgtct
ggcagaactgataggatagacagggatgcggatatggggggtgttttcatggttttgaaa
gaaatccatggtatcgagggaatcaagaccatggtgtggcttgatgactcaataattgtc
ggtactggtaatgggtatactttattttcttgcattactgggcaaagtgctcctatgttt
tcccttccggattcatccagtcctccatgtcttaaatgtctattgaaagaccataatgtg
cttctgttcgttgataatgttgggatcattgtcaatgcttttggacagccggttggaggg
agtttagttttccgaaatcttccagattctgttggggagatatcttcccatgtgatagtt
gtaaagggtggaaggatggacttataccacaagagaactagtctctgcattcagtcactt
tcttttgcaggggaaggagttgggccttgtcttgtcgcaaatgaggagagcagaacaggg
gaacttgttgttgttgcaacaccttctaaggccatttgttatcggaaagtatctgctgaa
gaacaaataaaagacctattgaggaagaagaattttaaggatgccatctctttagtagaa
gaacttgagtgtgatggtgaaatgacaaaggaaatgctttcttttgtgcatgctcaagtg
gggtttctcttgttatttgatttgcattttgaggaagccataaaccattttttgctgtcg
gaaacgatggaaccttctgaagtatttccatttataatgcgggatccaaatcgctggtca
ctgctggtccccaggaagcggtactggagcttgcatccaccgcctttacctcttgaagat
gttatagatgatgggttaatggctattcaaagagctggatttcttaggaaggcaggtgta
gagactgcaactaatgaagattttcttttgaatccaccaagtagagcatatctattggag
tcagcaatccagtacatgatcaggtatctacaagtttctcgggagaaggatttgacacca
tcagtgaaagagggtgttgacactcttcttatgtatctctatagagcccttaatcgtgta
gatgacatggaacagttggcgtcttcagagaatagttgtgtagtggaagagttggagact
ctattagatgatcctgggcatttaaggacacttgctttcttgtatgcaagtaaagggatg
agttcaaaagctcttgcaatttggcgtgttttggcaagaaattattcttctggcctatgg
aaagacactgtagttgaagatgaaacttcagatacctgcaagaatgttatctctggtaag
aagactgctgcaatagaagcaacaaaacttcttgaggagtcatctgatgaagacatggtt
ctgcaacatcttggatgggttgcagacgtggaccaggggcttgctgttagaattttaaca
tcagataaaagagccaatcagcttgcacctgacaaagttattgctgccattgatcctaaa
aaggtggagattcttcagaggtatttgcaatggttgattgaggatcaagactcttatgat
actcgattccatactttatatgctctttcacttgccaaatcagctattgaagctgtagaa
atggaaatcaatcaacaaaccctggacactgcaacatcagaaaagacaaatatttctgat
gttgagattggttcaatctttcataattcagtcagagagagactgcagtttttcctacag
tcctcagacttgtatgatccagaagaagtccttgacttggtcgaaagttcagagttatgg
ctcgaaaaggctattctttacaggaaacttgggcaagagacattggtgctccaaattttg
gctttgaagctggaggacagtgaagcagctgaacaatattgtgcagaaattggtagacct
gatgcctatatgcagctacttgatatgtatttggatccccaagacgggaaggagcctatg
tttaaggctgctgttcgccttcttcacaatcatggagaatctttggatccactgcaagtt
ctggagagattgtcaccagatatgcctttacaactagcatcagatacaatattgagaatg
ctgagagctcgagttcatcatcatctccaaggacaaattgtacacaatctttcccgcgcc
atagacatagatacaaggctatcaagattggaggagagatcaaggcatgtccagattaat
gatgagagcctgtgtgattcctgtcattcccgccttggcacaaagctatttgcaatgtat
ccagatgattctattgtttgttacaagtgttttcgtcgtcagggtgagtccacatcagtc
acaggacgtaacttcaagcgagatatcatattcaaaccaggttggcttgttaacagataa

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