Nelumbo nucifera (sacred lotus): 104597120
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Entry
104597120 CDS
T04131
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03013
Nucleocytoplasmic transport
nnu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104597120
03015 mRNA surveillance pathway
104597120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104597120
03041 Spliceosome [BR:
nnu03041
]
104597120
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104597120
Spliceosome [BR:
nnu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104597120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
104597120
NCBI-ProteinID:
XP_010256831
UniProt:
A0A1U7ZTE1
LinkDB
All DBs
Position
Un
AA seq
925 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFSPELDHLVDMTKVKMDVIRPWIANRVTELL
GFEDEVLINFIYGLLDGKDVNGKEVQIQLTGFMEKNTGKFMKELWTLLLSAQKNASGVPQ
QFLDAKEEETRKKKAEADRITHEIQKKKEKELRELEREKMKKMDGEIDVLRTTNSASDPI
SRRSQSRASSVHPDEEKEADGINGSRGNNRVSRSPHLVDHSPSSHRSTHSRSISRSFSNS
RSYSGDGHKSRSISGSPQPRRRSNSPEREYRSPRRRSISPHRRHSPRRSRSPLRRRSPHS
RHKSPSLVRRRLPSPLRRRSPSIIRRRSPSPVRRRSPSPVRRRSPSPIRRRSPSLVRRRS
PPPLRRRSPSPPRHRSPVRRRPPIRRRSRTPSRHRSPSPLGQSLSPPRRRSLSPGRRRSP
LPRSPRYRRRSPRQRNRSGSPYRSHSPAYRSRRSLSRDRDLRSNGVDNRRYRYDASERKM
SPVRKTPEREEVDRSIHARKEPVSVSRRPPISLRSPQRDPDDQRKARQKMPTISPSPEMS
RSPSVNSPRERRMSPSEDSLSESXVRQTRERLYHRDSPSPARQPRKHVSRHDNSVTSEEE
ETSHARDGGDNRTDSSRKRAKHSPPIDSRKRSPSRNLRQERCSLEKLDHRGSGEDWSHLN
DTLLRKKDGEKKSEKASARTDPPRSPTKQKSPMLEEIEYGPGRPEGESYSLDRVRDEKRD
SPIEELQRSHPRDGQKSDEKKHSRSSHSEGTDRVHKMEAVNKSMKKVDRKNRAIATGSES
EENDKYRLEYMEKRKHKRMDRHEMNSEDDECHDSEIDERKEAKRRRKEEKRLRKEEKRRR
REERHRRKEEKRAAKLKAKSMDTVTPPSDFEKNRNDGNDSDDEADLRRESHPCGADDTES
EQKKLEIELRKKALESLRAKKGINN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggattcttccggggcacttctgccgatcaagacactcggttctcgaataaa
caagcgaaactattgaaaacccagaagttctcgcctgaattggatcatctggtggacatg
acgaaggtgaagatggatgttattaggccttggattgctaatagggtgaccgagcttctt
ggattcgaggatgaagttctaatcaacttcatatatggacttcttgatggaaaggacgtg
aatgggaaagaggttcagatccagctcactgggttcatggagaaaaatactggaaagttc
atgaaggagctttggactcttctgctcagcgcccagaaaaatgcgagtggtgtccctcaa
cagttcttggatgccaaggaagaggaaactaggaagaaaaaggctgaggcagatcggatt
acacatgaaatccagaaaaagaaagaaaaagagttaagagagctggagcgagagaagatg
aagaagatggacggcgagattgatgtcttgaggaccactaattctgcatctgacccaatc
tcaaggcgttcacagtcaagagcatccagtgttcatcctgatgaagaaaaagaagctgat
gggataaatgggtctaggggaaataacagggtctctagatcaccgcacttagttgatcac
tccccttcatctcatcgaagcacacattccaggtctatcagtaggtcattttccaattca
aggagctactcaggtgatggacacaaatcaagaagcatatctggatcacctcaaccacga
agacgctctaattctcctgaaagggagtatcgatcgccacgaagacgatctatttctcca
catcgcaggcattcaccaagaagatctcggtctcctttaaggcggaggtcacctcattca
cgacacaaatcaccttctcttgtgcggcgtaggctcccttctcctttgcgacgcagatct
ccatctattattcggcgtaggtcaccatctcccgttcggcgtaggtcaccatctcccgtt
cgacgtaggtcaccatctcctattcgacgtagatcaccatctcttgtgaggcgtcgatcc
ccacctcctttgcgtcgaaggtctccatcacctccaaggcataggtctcctgtgagacgg
aggccccccattcgtaggcggtcacgaacaccttcacggcataggtctccatctcctctt
gggcagtcactatctccacctcggcgtcggtctctatcaccagggaggcggcggtcacct
cttcctaggtccccaagatatagaagaagatcgcctagacaaagaaacaggagtggtagt
ccttatagaagtcacagtcctgcataccggagccgaaggagcttgagtagggatcgtgat
ctccgtagtaatggagtagacaacagaagataccgttatgatgcctctgaaaggaaaatg
tctcctgtgcgtaagacccctgagagagaggaggttgatcggtctattcatgcacgcaag
gagccagtctctgtttctcgccgaccaccaatttctttgaggtcaccacaacgggatcca
gatgatcaaagaaaggcccgccaaaagatgcccactatttcaccatcaccagaaatgtct
cgaagtccatcagtaaattcaccacgtgaacggagaatgagtcctagtgaagatagtctg
tctgagagcyctgtaaggcaaacaagggaacgattataccatcgtgacagtccatctcct
gctaggcaaccaagaaaacatgtttcacgtcatgacaactcagtaacaagtgaggaagag
gaaactagtcatgccagggatggtggtgataatagaactgattcttcacggaaaagagct
aagcattcaccgccaattgatagtcggaaaagatctccttcaaggaacttacggcaggaa
aggtgctctcttgaaaaattagatcaccgtgggtctggtgaagattggagtcatctgaat
gacacattattaaggaagaaagacggggaaaaaaagagtgagaaagcttcagcaaggact
gatcctcctcgaagtcctactaaacaaaaatcaccaatgctggaagaaattgaatacggg
ccagggagaccagagggggaaagctattcattggatcgtgttagggatgaaaaaagggat
tctccaattgaagaattacaaagatcacaccctagagatggccaaaaatctgatgaaaag
aagcattctcgttcaagccactctgaaggcacagatcgggttcataaaatggaagctgtt
aacaaatcaatgaaaaaggttgataggaaaaaccgggccattgctaccggttctgaatct
gaggaaaatgataagtacaggttggaatacatggagaagagaaaacataagagaatggat
agacatgaaatgaattcggaagatgatgagtgtcatgattctgaaattgacgaaaggaag
gaagcaaaaagaagaaggaaagaagaaaagagattacgtaaagaagagaaacgccgacga
cgtgaagaacggcaccgtagaaaggaagaaaagcgtgcagccaagctgaaagccaagtca
atggatactgtgactccgccttcagatttcgagaaaaaccgaaatgatggcaatgattca
gatgacgaggctgacttgaggagggaatctcatccatgtggcgctgatgacacagagtct
gagcagaaaaagcttgaaattgagctgcgaaagaaggctcttgaatcactaagagcaaag
aagggcatcaataactaa
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