Nelumbo nucifera (sacred lotus): 104597280
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Entry
104597280 CDS
T04131
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnu03009
]
104597280
Enzymes [BR:
nnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104597280
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
Pre-60S particles
Helicases
104597280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Tox-REase-2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104597280
NCBI-ProteinID:
XP_010257043
UniProt:
A0A822Y3Z3
A0A1U7ZXN5
LinkDB
All DBs
Position
Un
AA seq
593 aa
AA seq
DB search
MAEASTDSLNRVLTNVRFSELKPPLSPPVLDALTGAGFHFCTPVQAATIPLLCSFKDVAV
DAATGSGKTLAFVVPLIEILRRSSETPKPHQVMGVIISPTRELSSQIYHVAEPFISTLVN
VKPMLLVGGLDIKADMKKIVEEGANLLIGTPGRLYDIMERMGVLDMRNLEILILDEADRL
LDMGFQKQINSIISRLPKLRRTGLFSATQTEAVEELTKAGLRNPVRVEVRTEAKVLDELA
SSQQPSSSKMPLGLHNEYLECEAEKKPSQLVDFLAKNMSKKIIVYFMTCACVDYWGAVLP
CLTVLKGCPLVSLHGRMKQTAREKALTSFSALSKGILLCTDVAARGLDIPGVDWIVQYDP
PQDPNVFIHRVGRTARMGKSGSAIVLLLPKEEAYVEFLRIRGVPLAERKCSDEALDIIPQ
IRSAARKDRDVMEKGIKAFVSYIRAYKEHHCSYIFRWKDLEIGKLAMGYGLLQLPSMSEV
KHHSLSVDGFTPVDDINVAEIKYKDKLREKQRQKNLKAKKTLEHQEEKPQKPKSNVNAPA
KVTRKKTARQRRAAQTVEDEEELDRDYRLLKKLKKGAIDESQFAKLTGTEELL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcgtcgacggattctctcaatagagtgctgacaaatgttcgcttctctgag
ctgaaaccaccactgtcacctcccgttctcgatgctctaacgggagctggttttcacttc
tgcacaccagttcaggctgccacaatcccgttattgtgcagttttaaggatgtcgccgtc
gatgccgctactggttcaggaaaaaccctagctttcgtggttcctcttatcgagatcctc
cgacgatcttcagagactccgaaacctcatcaggtcatgggggtaattatttctcctaca
agagagttgtcatcacaaatatatcatgttgcagagcctttcatttcgacattagtgaat
gttaagcctatgcttcttgtggggggtttagatataaaggcggacatgaagaaaatagtg
gaggaaggagcaaatttgttgataggcacacctgggaggctatatgatatcatggagcgc
atgggtgttttagatatgcggaatcttgagattctcatcttagatgaggccgatagactc
ttggatatggggttccaaaagcagataaattccattatatctcgcttaccaaagcttcgt
agaactggtcttttttcagctactcaaactgaggctgttgaagagcttacaaaggcagga
ctaagaaatcctgtgagggttgaagttcgtacagaagccaaagtattggatgagttggca
tcctcacagcaaccaagctcttcgaaaatgcccttgggccttcataatgagtatttggaa
tgtgaagctgagaagaagccatcacaacttgttgatttcttagcaaaaaacatgtccaaa
aagatcattgtttatttcatgacatgtgcttgtgttgattactggggagctgtccttcca
tgccttactgttcttaaaggttgtcctttagtttctcttcatgggaggatgaagcagact
gcaagggagaaagcattaacatcctttagtgccctttcaaaaggaattcttctatgtacc
gatgtagcggcacgggggcttgatattccaggggttgattggattgtgcagtatgatccc
cctcaagatccaaatgttttcatacacagagttggccgaactgcacggatgggcaaatcg
ggaagtgccattgttttactattgccaaaggaggaagcttatgtggagttcctgcgaatc
agaggggtccctcttgcagagagaaaatgttctgatgaggctcttgacattattcctcag
ataagatctgcagcaagaaaggatcgtgatgtcatggaaaagggaatcaaagcatttgtc
tcatacatccgtgcatacaaggaacatcattgctcctatatttttaggtggaaagaccta
gagattgggaagttggccatgggatatggcttgttgcagcttccttcaatgtctgaggtg
aagcatcactcactctctgttgatggttttactccagttgatgatatcaatgtggcagag
atcaagtacaaggataagcttcgtgagaaacaaagacagaagaacttgaaggcaaagaag
acattagagcatcaagaggaaaaaccccaaaagcccaaatcaaatgtaaatgctccagct
aaagttacgagaaagaaaactgctaggcagcggcgggctgcccagactgttgaagatgag
gaagagttggaccgggattaccgcttactgaaaaaactgaagaaaggggctattgatgaa
agtcaatttgcaaagcttacaggaactgaagaattgctttga
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