Nelumbo nucifera (sacred lotus): 104597434
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Entry
104597434 CDS
T04131
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104597434
09123 Folding, sorting and degradation
03018 RNA degradation
104597434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104597434
03041 Spliceosome [BR:
nnu03041
]
104597434
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104597434
mRNA degradation factors
5'-3' decay
Lsm complex
104597434
Spliceosome [BR:
nnu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104597434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
104597434
NCBI-ProteinID:
XP_010257259
UniProt:
A0A1U8A739
A0A822ZKQ8
LinkDB
All DBs
Position
Un
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccgtaaagaaactgttttagatctggcaaagtttgttgacaagggtgtccaa
gtcaaactaactggtggaagacaagtgacagggacattgaaaggatatgaccagttactg
aaccttgtactggatgaagctatagaatttctaagagatccggatgatccactgaagaca
actgatcagacacgtcgtcttggtttaatagtatgtaggggaacagcggtgatgcttgta
tccccaacagatggtacagacgagatagccaatccctttgtccagccagatggggcttag
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integrated database retrieval system