Nelumbo nucifera (sacred lotus): 104597477
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Entry
104597477 CDS
T04131
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03022
Basal transcription factors
nnu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104597477
09124 Replication and repair
03420 Nucleotide excision repair
104597477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104597477
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104597477
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104597477
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104597477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Tfb4
IBR
Motif
Other DBs
NCBI-GeneID:
104597477
NCBI-ProteinID:
XP_010257340
UniProt:
A0A1U7ZSR1
A0A822ZFV0
LinkDB
All DBs
Position
Un
AA seq
433 aa
AA seq
DB search
MSNFGTGSRYEPKNTTNGEERQLTGEGEEEDEEDEEGNGRGMAAWERAYADERSWENLQE
DESGILHAIDNKVLHHAQYRRRIRSLFSSATTSRIQKGLIRYLYIVIDLSRAASEMDFRP
SRMAVVAKHVEAFIREFFDQNPLSHIGLVTIKDGVAQCLTDLGGSPDSHIKALMGKLECS
GDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVVG
LSAEIYICKHLCQETGGSYTVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAA
EGVVSICSCHKEAKVGGGYTCPRCKARVCELPIECQICGLTLVSSPHLARSYHHLFPITP
FVEVSSSLVNNPHHRLPKTCFGCRQTFLAPGNKSSFHVACSKCNQHFCLDCDIYIHESLH
NCPGCESRRFQSK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactttggtactggaagtagatatgaacccaagaacaccactaatggtgaggag
agacaattgactggtgaaggtgaagaagaagatgaggaggatgaggagggaaatggaaga
ggtatggctgcatgggagagagcttatgctgacgagagatcatgggagaacttgcaagaa
gatgagtctggcatccttcatgccattgataacaaggtcctccatcatgctcagtaccgc
cgccgcatccgctccctcttctcttctgctaccacttccagaattcagaaaggcctcatt
cgatacctctatattgtcattgatctctccagggcagcttcggagatggatttccgacca
agtagaatggctgtagttgcaaaacatgtggaggctttcattagagagttctttgaccag
aatccacttagtcatattggccttgtaactatcaaagatggggttgcccaatgcttaaca
gatctaggtggcagtcccgattcccatataaaggcattgatgggtaagctggaatgctca
ggtgattcctccctacagaatgctttagatctcgttcacggctatctgaaccaaattccg
tcatacggtcaccgtgaagtcttaatcttatattctgctctcagtacctgtgacccagga
gatataatggagactattcagaaatgcaagaaatccaaaataaggtgttcagttgttggt
ctctcagctgaaatctatatatgtaaacatctctgccaagaaactggaggatcatatact
gtagcattggatgagtctcattttaaggagttattgctagagcatgcccccccaccccca
gcaatagcagagtttgctatagccaatttaatcaaaatgggcttccctcaaagagcagca
gagggtgttgtctccatttgttcctgtcacaaggaagctaaggttggtggtggctacaca
tgtccaagatgcaaagcacgtgtgtgtgagctgcctatcgaatgccagatctgtgggttg
acgctcgtttcttctccccatttggcaaggtcgtaccatcatcttttcccaataacacca
tttgttgaggtctcttcttcactagtgaataacccacatcacagattgccaaaaacttgc
tttggttgccggcagacttttcttgctcctggaaacaagtccagctttcatgttgcatgc
tccaagtgcaatcagcatttctgccttgactgtgacatttatattcatgagagtttacac
aactgccctggttgtgagagccgccgatttcaaagcaagtaa
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