Nelumbo nucifera (sacred lotus): 104597703
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Entry
104597703 CDS
T04131
Name
(RefSeq) general negative regulator of transcription subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104597703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104597703
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104597703
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104597703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
CFAP410_C
Motif
Other DBs
NCBI-GeneID:
104597703
NCBI-ProteinID:
XP_010257710
UniProt:
A0A1U7ZZB8
LinkDB
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Position
Un
AA seq
896 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVSELESQIDCFEADIEGLSVKKGKARPPRLTHLETSIARHKA
HIMKLELILRLLDNDELSPEQVNDVRDFLDDYVERNQEDFEEFSDVDELYSSLPLDKVES
LEDLVTVVPPGLAKGVGSASAVLSLKTPIAASTTQMPATLASTVQQGNSIQDQAEESASQ
DSSSDIAPRTPPSKNSTVGSSTSSTPAGSHVATVTGNLPTRNLAGGSTTSAILSAPASIR
GVVDNSVATVSPSPVNLSNSTKEEENSSFPGRRPSPALTEIGVGRGIGRGSMAGGVPSQP
SNNVPLSSGSSLPGNGALGAVPTASDMAKKNILGADSGIMQPLVSPLSNRILLPQVSKGN
DGTGSADSNNSGEGAVVGGRVFSPSVVPGVQWRPGTSFQTQNEAGQFRVQPDQREKFLQK
FHQVQQQQQQHSQLAGGNHKQFTTQQQGSLLQQFNSQNSSLSPQVGLGLGVQGAGLNSVT
SASLQQPNFIHPQAAQRALSSPGPKESDTSHTKVDDQQQQQNPSDDSSVEPTTSVGLSKN
LMNEDDLKSPYSVDAPVGGSGSLMEPAQVPRDTDLSPGQPLQSNQPSLGLGVIGRRSASD
LGAIGDNLSGSTTNSTGMHDQVYNLQMLEAAYYKLPQPKDSERAKSYIPRHPAVTPPSYP
QMQAPIVDNPAFWERLGVDTMGTDTLFFAFYFQQNTYQQYLAARELKKQSWRYHRKYNTW
FQRHEEPRVTTDECEQGTYVYFDFHIANDDSQHGWCQRIKTEFTFEYSYLEDELVV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggagccagtcgaaaacttcagggtgagatcgatcgagttctgaagaaggtccaagaa
ggcgttgatgtcttcgacagcatctggaacaaggtttacgacacggataatgcgaaccag
aaagagaaattcgaggcggatttgaagaaagaaatcaagaaactgcagagataccgagac
cagatcaagacatggatacaatcgagcgagataaaggataagaaggttagtgcctcttat
gagcaggctctgctggatgctcgcaagcttattgagcgtgaaatggaaagatttaaagtc
tgtgaaaaggaaactaagacaaaagccttctcaaaagaagggttgggtcaacaacctaaa
actgatccaaaagagaaagcaaaatcagagacaagggattggttgaacaatgtggtttca
gagctggaatctcaaattgattgctttgaagctgatattgagggcctctctgtgaagaaa
gggaaggcaaggccacccagactgactcatttagagacctctattgctcggcataaagct
catataatgaagttagagttgattttgagattgctggataatgatgaattgagtcctgag
caggtcaatgatgtaagagactttttggatgactatgttgaacgcaaccaggaggatttt
gaagaattcagtgatgttgatgagctctacagctctctaccattagacaaagtggagtca
cttgaagatctcgtaacagttgttcctcctggccttgctaagggtgtcggttctgctagt
gcagttttgagcttgaagactcctattgcagcttcaacaactcaaatgccggccacatta
gcgtctactgttcagcaaggtaattccattcaggatcaagctgaagagtctgcttcccag
gacagtagttccgatattgctccacgaaccccaccttcaaaaaatagtacagtgggttct
tcaacttcatcaacaccagcagggagtcatgtagctactgttactggcaatttgccgaca
cgtaatttggctggtgggtcaactacttcagcaatcctttcagctccagcatctattcga
ggtgtggtggataactctgttgcgactgtttctccatccccagtaaacttgtctaattcc
actaaggaagaagagaactcaagcttccctggtcgaagaccatcaccagctcttactgaa
attggtgtaggaagaggaattggtagaggttcaatggctggaggtgtacccagccaacca
tcaaacaatgtacctttaagttctggaagttcacttcctggcaatggagcgcttggtgca
gtccctactgcttctgacatggcaaagaaaaatattttaggggctgatagtggcatcatg
caaccattggtttccccactaagcaatagaattctcttaccccaggtatctaaggggaat
gatggaactggttctgctgattctaacaattctggtgagggtgcagttgtaggtggcaga
gttttctccccttctgtggttccaggtgtacaatggaggcctggaacatcatttcagact
cagaatgaagcgggtcaatttcgtgttcaacccgatcagagagagaaatttttgcagaaa
ttccaccaagtgcaacagcagcagcagcagcattctcaactcgctgggggaaatcataag
cagttcactacacaacagcaaggctcactattacagcagtttaattcacaaaactcatca
ttgtcacctcaagttggactgggtcttggggttcagggagcaggtctaaattctgttaca
tcagcttctttacaacagccaaattttattcatccacaggctgctcagcgtgctttgagc
tcacctggacccaaagagtcagacactagtcatacaaaagttgatgaccaacagcaacaa
caaaatccatctgatgactcaagtgttgaacctaccacaagtgttgggctcagcaaaaat
ctcatgaatgaggatgatctgaagagtccatactcagtagatgcacctgttggaggatct
ggctcactaatggaacctgcccaggtgccaagagatactgatctctctcctgggcaacca
ttacaatccaatcaaccttcacttggtttgggggtcattggtcggagaagtgcttctgac
cttggtgcaattggcgataatctcagtggatccactacaaattccacgggaatgcatgat
caagtatacaatctgcagatgcttgaggctgcatattacaaacttcctcaaccaaaagac
tcagaacgtgcaaaaagctacattcctagacatcctgcagtgacacctccaagctaccct
caaatgcaggcacccattgttgacaatcctgccttttgggagcgattgggtgttgatact
atgggcactgatactttgttctttgcattttactttcaacagaatacttatcagcaatac
ttggccgcaagagagttgaaaaagcaatcctggagataccacaggaaatacaacacatgg
tttcagcggcacgaggaaccaagagtcaccactgatgaatgtgaacaagggacttatgta
tactttgatttccatattgccaatgatgattcacaacatgggtggtgccagaggattaag
actgaattcactttcgagtacagttatcttgaagatgagcttgttgtatag
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