Nelumbo nucifera (sacred lotus): 104597815
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Entry
104597815 CDS
T04131
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnu03009
]
104597815
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104597815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
TIR
Motif
Other DBs
NCBI-GeneID:
104597815
NCBI-ProteinID:
XP_010257842
UniProt:
A0A1U7ZU01
A0A822YGN9
LinkDB
All DBs
Position
Un
AA seq
2710 aa
AA seq
DB search
MATRSHALAVKSLNKSTGRKRFVFKTFSQRVEEIDINVYRSLDPLKSEPSKGSSFFRDCL
VEWRELNTAEDFISFYEEMMPWVQTLPQVLLHKETIMHKLLSRLQIKARLSLEPILRLIA
ALSRDLLEDFCPFLQRITDCIVSLLKDGAEREPEILEQIFTSWSCIMMYLQKYLVRDVVH
VLKITVHLRYYPKDYIQEFMADAISFLLRNAPEKQLKKGIRKIINEVVKRPSDVRKSGVS
ALLWYTMRGTPSRLHSRAEQVLLLLVNNSIFEIGDKSAQGSDTIVEVVTITFQRLCEELQ
QELNLIFDCLLVEISDCVIQEQLLHLTRLLSILISTVQFTTGGKVSDYQPMLNLVGLLMR
TYIKPSGNGMVEDHSYDLVNKILQFMLCLLDGLHNSNDASAIASISSQWAPIFELRNPCL
LNFIKELLGKDPSLAYVFRSHILSALSDMVEASPEEVMYLILIFFERVQVKMQLSDHLHG
TSGEVTSKMCNLFQKDICHWVREINDLANGNSLNIQFHESKLALLWGTLSCYPHITGTQA
ESSLIMDLVNALDQLLRTGADKIAGLPIQTWQSLIGAGLASYHKLILGNTAELAETSNFL
RIARQYRSSSHILFSVADFLDSVHGAKYQEHQGHKIYHPELKAEKAIDAVKLFSENLCHS
EKDLRLSTLRILCHYELLDAQLSKMDEPPKKKLKTDGSQLCCAELQCHNVVQLLSIESTP
LSISTSRKIVVLISRIQMDLSAGRISEAYAPLLLNGVIGIFHNRFGHLWEPTLECLVVLI
NKYCTLVWDKFVCYLEQCQSKFLTFCSELGSTPPGSSNKSCDLVERFNSFVSPDSDSTPC
ATVVSLLLQLLQKIPTISESRSRHLIPLFLKFLGYTSNDFESIGSFNSYACKVKEWKGVL
KEWLNLLKLMRNPKSLYLSKVIKDILINRLLDENDANIQMQVLGCLLNWKDDFLVPYEQH
LINLIISKSLREELATWTLSKESPLVQEQHRMDLIPLVIRILIPKIRKLKTLASRKNPSI
HHRRAVLCFLAQMDIDELPLLFTLLLKPLQSNFTGTEGSHNFFWSHRVSMDEFQASGFIN
FFSLDNTDSSSWKKTYGFLHVIEDILRVFDELHIKPFLNLLMGFVVRVMESCTLRLDSAK
SSGSCLVGNFSSTYMDVHDTTSATENPTMSNTTVKQLKELRSLCLKIISFTLNKYESHDF
GGEFWDLFFISAKPLIDSFKQGGSSSERPSSLFSCFFAMSKSQALISFLCRDKTVVSSIF
SILTVQTATDAVVSYVLGFIENLLNLNNDLDHHEDNAVERVLLPNLEALICSLHCHFHRH
NKTARKLVKWPEKRELVIFKLLSKYVKDPSLARKFVDILLPFLAEKARKTEECMEGLQVI
QSIVPVLENDISGEILKAISPFLISGGLDVRLSICDLLDCLAMSNPSLVFLARLVRELNA
ISAMEMGEMDFDTRISAYENISPEFFSTIKDTHALIILSHCVYDMSSEELILRQSASRLL
LSFFQFAAQILGSEAQGDEQIYEARGDVDISWTKVSVQRIIEKFFLKHMGTAMCKEVSIQ
KEWIALLREILLKLPEMRALNSFRSLCSEDAEVDFFNNILHLQKHRRARALSRFRNIFST
GDFPENIIKKIFVPLFFSMLFDVKDGKGEHVRNACLETLACISGHMKWDSYRAFLVRCFK
EMTLRPNKQKVLLRLISSVLDQFHFSETCYRQGPKDKASEDSSPGITGMGSSIILHRCTN
SSELTEVQLFLQKTILPKIHKLKEILNAESEEVNVTITLVELKLLKLLPLDTMESQLPSI
IHHISNFLKNRKVSVRDEARSALAACCKVLGPEYFQFIVKVLRATLKRGYELHVLGYTLN
FLLSKCLFNPVMGKLDYCLEELLSIAEDDILGDVAEQKEVEKIASKMKETRKCKSFETLE
LIAEGIMFKTHALKLLSPVKSHLQKHITPKMKAKFQTMLNHIAAGIESNPSVDSTDLFIF
VYGLIEDGSREEDPQGHTISKPAKQCSNELANESDSSGCAIGSESQISYLVTVFALGVLR
NRLNNMKLDGKDEKLLSLLDPFVKILGNCLSSKYEDILSAALRCLTPLIRMPLPSLEVQA
DKIKILLLDIAQKSGIVSSPLMQSCLRLLTVLLRCTRITLSTDQLHMLIQFPLFVDLERN
PSFLALSLLRAIVGRNLVAPEIYDLVTKVSELMVTTQIEPIRKKCSQILLQFLLDYRLSE
KRLQQHLDFLLSNLSYEHSSGREAVLEMLHAILMKFPKSVVDGQAHTLFLHLVVCLANDN
DNKVHSMVGAVIKLLIARTSQNSLHPILEYSLLWYMGKEQHLWCAAAQVLGLLVEVLKKG
FQRHINNILPVTRDIFKLALGVVKDKQMDCANEDKIPLWKEAYYSLIMLDKMLLQFPELY
LERNLEEIWEAVCNFLLHPHMWVRSISNRLVSSYFATSTENSRLNPEKLNMETFLLMKPS
RLFWIAVSLFRQLRAGISDDAASNIITQNLVFATCGVHSLVGQMECMDIHRFWSALQVHE
QGYILAAFQMLGARKERTVFASLTSSKYEHDKESSQDLQSLLVSPLLKKMGKMALQMADT
QMKIVFNCFRMISAQIGQEDCQKYAIYMLLPLYKVCEGFAGKVITDGIKHLAEEVRESMR
GTLGAENFVHVYNQIRKNLKEKRDKRKQEEKLMAVINPVRNAKRKLRLAAKHRAHKKRKI
MTMKMGRWRS
NT seq
8133 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcgttcgcatgctctggctgtcaagtctctgaacaagtccaccggacgtaag
cgttttgtgttcaagactttctcccaacgagtggaagaaatcgacataaacgtctaccga
agtctcgacccattgaaatcggagccttccaaagggtcttcttttttcagagactgcctt
gtagaatggcgggaactaaacactgcagaggacttcatttcattttatgaggaaatgatg
ccatgggtgcaaacattaccacaagttctgttgcacaaagaaacaattatgcataagctg
ctttctaggttgcaaatcaaggcgagattgtcacttgaacctatactcaggttgattgca
gctttatcgagagatctcctcgaagatttttgtccctttctgcagaggatcactgattgc
atagtgtctctccttaaagatggtgctgaaagggaaccagaaatccttgagcagattttt
acgtcatggtcttgtatcatgatgtatttgcagaagtatcttgtaagggatgttgttcat
gtgctcaagatcacagttcatttaagatattaccctaaggattatattcaagaatttatg
gctgatgcaatttctttcttgctgaggaatgcacctgagaagcaactaaagaaaggtatt
aggaaaatcataaatgaagttgtgaagagaccttcagatgtgagaaaatctggggttagt
gctttactttggtatactatgagaggaactccatcaaggctccattcaagagcagagcag
gttctgctgttattggtgaataattctatatttgaaattggtgataaatctgctcaaggt
tcagataccattgttgaggttgtaactattacctttcaaagattatgcgaagagcttcaa
caggagttgaatttgatatttgattgcttattagtggaaatatctgattgtgttattcaa
gaacagttgttgcacctgactcgtctactgtctattcttatttctactgtccagtttaca
acaggaggaaaagtttcagattaccaaccaatgcttaatcttgtggggttgcttatgagg
acatatatcaagccttctggcaatgggatggtagaggatcattcttatgatttggtcaat
aaaattcttcaatttatgttgtgccttcttgatgggctccacaattccaatgatgcatca
gccattgcaagcatatcttctcaatgggctcctatatttgaattgagaaacccatgtttg
ctaaattttatcaaagaattactgggaaaggatccatctctggcatatgtctttagaagt
catatattaagtgcgttgagtgacatggttgaagcttcaccagaggaagtcatgtatttg
atcctgatcttttttgaaagagtgcaagtgaaaatgcaactgtctgaccacttgcatgga
acatctggagaggtgacttcaaagatgtgcaatttattccagaaggatatatgccactgg
gtaagggagataaatgatctcgctaatgggaattcactaaatattcaattccatgagtct
aagttggctttgctctggggaactctgagttgctaccctcatattactggtacccaagca
gaatcgtccttaataatggatttggtaaatgcacttgatcaacttttgagaactggagca
gataaaattgcaggtcttcctatacaaacttggcaaagcttaattggcgctggtttagct
tcctatcataaattaattttgggtaatacagctgagcttgcagaaaccagcaacttcctc
cgtattgcaagacaatacagaagttcctcacatatattgttttctgtagctgacttttta
gattctgttcatggtgctaaatatcaagaacatcaaggtcataaaatatatcatccagag
cttaaggcagagaaggctattgatgctgtcaagttattttctgagaatttgtgccattca
gagaaggatcttcgtctttcaaccctaagaatattgtgccactatgaacttctggatgct
cagctatccaagatggatgagcctcccaaaaagaaattgaaaactgatggttcacagtta
tgctgtgctgaactccagtgccataacgttgttcagctcctttcaattgaatcaactcca
ctttcaatttctacaagcagaaaaattgttgtattgatttctagaatacagatggatctg
tctgctgggaggatctctgaagcttatgcgcctcttttactgaatggggttattggcata
tttcataatcgctttggccatctatgggaaccaacattggaatgccttgtggttctaata
aacaagtattgtacgcttgtgtgggataaatttgtttgttatcttgaacaatgccaatca
aagttcctcactttctgtagtgaacttgggagcacccctcctgggtcctccaacaaatca
tgtgatctggtggagcgcttcaattcatttgtttctcccgattctgatagtacaccatgt
gcaacagtagtatctttattgcttcagttattgcaaaagattccaactatttcagagtct
cggtcccgacaccttattcctttgttcttgaagtttttggggtacactagcaatgatttt
gagagtattggatcattcaactcatatgcttgtaaagtcaaagaatggaagggagtcctt
aaggaatggttaaatttgttgaagttgatgcgaaatcccaagtctttatatttaagcaaa
gttattaaagacattttaatcaataggcttcttgatgagaatgatgcaaacatacagatg
caggttcttggctgcttgttgaattggaaagatgacttcttagtcccatatgagcagcat
ttgataaatctaatcatttcgaaaagtttacgggaagagcttgcaacatggactttgtcc
aaggagtcccctcttgttcaggaacagcacagaatggatttgattcctttggtaatccgg
atattgataccaaaaattagaaagttaaagacactggcctcacggaagaatcctagtatt
catcaccgaagggcagttctatgtttcttggcacaaatggatattgatgagcttcctctt
ttattcaccttgcttctaaaaccattgcaatccaactttactggaactgaaggttctcat
aatttcttttggagccacagagtttccatggatgaatttcaagcatctggttttataaat
tttttcagcctggataatacagatagctcgtcttggaagaagacttatggtttcctgcat
gtcattgaagacatcctcagagtttttgatgagttgcacattaaacctttccttaaccta
ttgatggggtttgttgtccgggtaatggaaagctgcacgttgagacttgacagtgcaaag
agcagtggatcttgtctagttggaaatttttctagcacctacatggatgttcatgacacg
accagtgcaacagagaatccaactatgtctaatacaactgtgaagcagttaaaggaattg
agatctttgtgcctgaagatcatatctttcactctgaataagtatgaaagtcatgatttt
ggtggtgaattctgggatttgttctttatatcagcaaaacctttgattgacagtttcaag
cagggtggttctagcagcgaaagaccaagttcactgttctcatgcttttttgcaatgagt
aaaagccaagcgctaatctccttcttgtgtagagacaaaactgtagtttcttctatattt
tcaattctaactgtgcagacagcaactgatgctgttgtatcatatgttcttggtttcatt
gagaacctcctgaatctcaataatgatttagatcatcatgaagataatgctgtagaaaga
gttctactcccaaacctcgaggcactcatttgtagtttgcactgtcatttccatcgccac
aacaagactgcaagaaaattggtcaagtggcctgaaaagcgggagctggtgatattcaaa
ctgttatcaaaatatgtaaaagatccttcattggcaaggaaatttgttgatattttactt
cccttcttagcagaaaaagctcggaaaacagaagagtgcatggaaggtttgcaagtgatt
caaagcattgttccagtattggaaaatgatattagtggagaaattttaaaggccatttct
ccatttcttatttctggtgggctggatgtaaggttgtccatatgtgatcttcttgattgt
ctggctatgagtaacccttccttagtctttctggcaagacttgtccgtgaactgaatgcc
atctctgcaatggaaatgggtgaaatggattttgatactagaattagtgcttatgaaaat
attagcccagagttcttctcgactatcaaagatactcatgcattaataatcttatctcac
tgtgtatatgatatgtcatctgaagaattgattttaaggcaaagtgcatccaggttgttg
ctctccttcttccagtttgccgctcaaattttgggcagtgaagcccaaggtgatgaacaa
atttatgaagctaggggtgatgttgacatctcttggactaaagtgtctgttcagcgtatc
atagaaaagttctttctaaagcatatggggactgcaatgtgcaaggaagtttccattcaa
aaggagtggattgctttgctcagagaaattttgttgaagcttccagagatgcgtgcttta
aattcatttaggtctctttgcagtgaagatgcagaagttgactttttcaacaatattctt
cacctacagaaacacaggagagcaagggcgttgtcacgctttaggaacatctttagtact
ggagactttccagagaacatcataaagaaaatatttgtcccgcttttcttcagtatgctt
tttgatgtgaaagatggaaaaggagaacatgttagaaatgcatgcttagagacacttgct
tgtatttctggtcacatgaaatgggattcataccgtgcattcctagtcagatgttttaag
gagatgaccttgaggcctaacaaacaaaaggttctattgaggctaatttcttctgttctg
gaccagtttcatttctctgaaacttgttacagacaagggccaaaagataaggcttctgag
gattcaagtcctggtattactggaatgggttcctccatcattttgcacagatgtactaat
tcttctgagcttactgaggtccaattgttccttcaaaaaacaatactaccaaagatacac
aaattgaaggaaatactgaatgctgaatctgaggaagttaatgtcaccatcactctcgtg
gaactaaagctattgaagttgctaccattggacaccatggaatcacaactgccgagcatc
atccatcacatatctaatttcctgaaaaatcgtaaggtaagtgttcgtgatgaagcccga
tctgctttggctgcttgttgcaaggtacttggcccagaatactttcagttcatagttaaa
gttttacgagcaaccttgaagcgaggatatgagctacatgtactgggatatactcttaat
ttcctattgtcaaagtgtcttttcaatccagtcatgggaaaactggattattgtttagaa
gagctgctctcaattgcagaggatgatattcttggagatgttgcggagcaaaaagaggtt
gaaaagattgcatcaaagatgaaagaaacaaggaagtgcaagtcttttgaaaccttggag
ttaattgctgaaggcattatgtttaaaacacatgctctgaagctgctttcacccgttaaa
tctcatttacagaagcatattacaccaaaaatgaaagcaaaatttcagacgatgttaaat
catattgctgcaggtatcgagagcaatccatctgtagattcaactgacctatttatcttt
gtatatggtctcattgaggatggtagcagagaagaagatccacagggtcatacaataagc
aaacccgctaaacaatgtagcaatgagttagctaatgaaagcgattcctctggctgtgct
attggctctgaatcacaaatttcatatcttgttacagtttttgctcttggggtactacgg
aatcgtctaaataacatgaagttggatggtaaagatgaaaaattgctgtcactgttagat
ccctttgtgaagattcttggtaattgcttgagttctaagtatgaagatattttatctgct
gctcttaggtgccttactccattgatacgaatgccattgccatcccttgaagtccaggct
gataagattaaaattttgctgttggatattgcccagaaatcaggaattgtgagcagtcct
ttgatgcagtcatgtctaagattgttaacagtgcttctgcgctgcaccagaattacgctt
tctactgatcaactgcatatgttgatccagtttcctctgtttgtggatcttgaaaggaat
ccttcctttcttgcactttcacttttaagggcaattgttggacgtaatttggttgcccct
gagatctatgatcttgtcacgaaagtttcagaattgatggtaacaactcaaatagaacca
attcgcaaaaaatgtagccaaattctattgcagttcttgcttgactatcgtctttctgag
aaacgcttgcaacaacatctggacttccttctttcaaatctgagctatgagcactcttct
ggaagagaagcagtacttgaaatgcttcatgccattctgatgaaatttcctaaaagtgtt
gtggatgggcaggcccatacattattcctccatcttgtggtttgtttggctaatgataat
gacaataaagtgcattcaatggttggtgctgtgataaaacttttaattgcgcgtactagc
cagaattcacttcatcctattttggagtacagtctcttatggtatatgggtaaagagcaa
catttatggtgtgctgcagcacaggtcttgggattacttgtcgaagtcctgaagaaaggg
ttccaaagacatattaacaatatattgccagtgacaagggacatttttaagcttgccctt
ggtgttgttaaagataagcaaatggattgtgccaacgaagataaaattccattatggaaa
gaagcttactattcactgattatgttggataagatgcttcttcaatttccagaattatat
ctagaacggaatctcgaggagatatgggaagcagtttgtaatttcctgttacacccgcat
atgtgggtacgcagcatatcaaatcgtcttgtatcctcatattttgctacttcaacagaa
aatagcagattaaatcctgagaagttgaatatggagacctttttactaatgaaacctagt
cgactattttggatagctgtttccctctttcgccagcttcgtgcagggatatcggatgat
gcagcaagcaacattattacccaaaatcttgtttttgctacatgtggggtgcattcttta
gtgggacagatggaatgcatggacattcacaggttctggtctgctctccaagtgcatgaa
cagggatacattcttgcagcttttcagatgcttggtgcaagaaaagaacgaactgtcttt
gcatctcttacttctagcaaatatgaacatgataaagaaagtagtcaagatcttcaatct
ttgcttgtctctcctcttcttaagaaaatggggaaaatggcacttcaaatggcagatact
cagatgaagattgttttcaactgctttagaatgatttcagcacagattggtcaggaagat
tgccagaaatatgcaatttacatgctcctacccttatataaagtttgtgaaggatttgct
ggcaaagttattacagatggtatcaaacatctggcggaggaggtgagagagagtatgcga
ggaacattaggtgctgagaactttgtgcatgtctacaatcagatcagaaagaacctcaag
gaaaagagggataagaggaagcaggaagagaagctcatggctgtaatcaatcctgtacgc
aacgccaagagaaagctacgacttgcagccaaacaccgtgctcacaagaagaggaagatt
atgacaatgaagatgggtagatggagaagttag
DBGET
integrated database retrieval system
