Nelumbo nucifera (sacred lotus): 104597819
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Entry
104597819 CDS
T04131
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104597819
Spliceosome [BR:
nnu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104597819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_10
DUF4523
DUF8400
Motif
Other DBs
NCBI-GeneID:
104597819
NCBI-ProteinID:
XP_010257870
UniProt:
A0A1U7ZVY6
LinkDB
All DBs
Position
Un
AA seq
493 aa
AA seq
DB search
MSSSSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFV
EFADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVAGNVLLVTIEGV
EAGDVSIDVIHLQVHVNTEKSSLSAYCIGGNITCLLKLVASLTVFSAFGFVHKIATFEKA
AGFQALIQFSDAETASSARNALDGRSIPRYLLPEHVGSCHLRISFSAHTDLNIKFQSHRS
RDYTNPYLPVNPSAIEGTMQSTVGPDGKKKELESNVLLASIENMQYAVTVDVLHTVFSAF
GTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVK
AHNDRSRDYTIPESGILPMQQAAAVPSAVGGWQTSQATSMYTGNVPAQLPDGQVASWDPS
MQTGRPTFVSVPTTFPGQTYPPPAVPTFPMAGGTMPVQQLDQGPAGITAQRPPQYGLQPG
VQPTPGQHPFYGQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcgtcggggcagcctcagttccggtacacgcagacgccgtcgaaggttctg
cacctacgtaaccttccttgggaatgcacagaagaagagcttgttgaactctgcaagccc
tttggcaagatagtcaacaccaaatgcaacgttggtgccaatcggaatcaagcctttgtc
gaattcgcagacctgaatcaggcaatatcaatggtttcctattatgcttcttcttctgaa
cctgcacaagttcgtggtaagactgtgtacatccaatattcaaataggcaagaaattgtc
aacaacaaaagctctggtgatgttgctgggaatgtcttgcttgtgaccatcgagggtgtt
gaagctggtgatgtcagcattgatgttatacatttgcaggtccatgttaacacggagaaa
tcttcattgtcagcgtactgcattggtggaaatatcacttgtttattgaagttggttgcc
tcacttacggttttctctgcttttggatttgtgcataaaattgctacatttgaaaaggct
gctgggtttcaggcattaatccaattcagtgatgctgagactgcatcttcagcccggaat
gcattggatggaagaagtataccgaggtatttgcttccagagcatgttggatcgtgccac
ttgcgtatctcattttctgcacatacagatctgaatatcaagttccaatctcatcgtagc
agggattatacaaatccttaccttcctgtgaatccttctgccattgaaggcactatgcag
tctactgtaggtcctgatggaaagaaaaaagaactagagagtaatgtgcttctagcttca
atcgagaatatgcaatatgctgtcacagtagatgttcttcacactgtattttcagcattt
ggaactgtccagaaaattgctatttttgagaagaatggtggaatgcaggcactaatccaa
taccctgatgtcacaactgcagctgttgccaaagaagccctcgagggacactgcatctat
gatggtggctattgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaag
gctcacaatgatagaagcagggattacacaatccctgaatccggtatactcccgatgcaa
caggctgctgctgtacctagtgcagtaggtggttggcaaacttctcaggctacatcaatg
tatactggcaacgtgcctgcacaacttcctgatggacaggtagcatcctgggatccaagc
atgcaaaccgggagaccaacatttgtctcagttcccaccacatttccaggtcaaacatat
ccacctcctgctgttcctaccttccctatggctggaggaacaatgccagttcagcagcta
gatcagggtcctgctggaattactgctcagagaccgccacagtatggcctccaaccaggt
gtgcaaccaaccccaggtcagcatcctttttatggtcagtga
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