Nelumbo nucifera (sacred lotus): 104598954
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Entry
104598954 CDS
T04131
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104598954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104598954
Spliceosome [BR:
nnu03041
]
Common components
Common spliceosomal components
SR proteins
104598954
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
RRM_3
Nup35_RRM_2
F07F6_N
Motif
Other DBs
NCBI-GeneID:
104598954
NCBI-ProteinID:
XP_010259573
UniProt:
A0A1U8ACV5
LinkDB
All DBs
Position
Un
AA seq
308 aa
AA seq
DB search
MVSGRMSGHLSRTIYVGNLPGDIREREIEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDS
RDAEDAIRSRDGYNFDGHRLRVELAHGGRGHSSTIDRRSSHGSGGSRGGVSRRSEYRVLV
TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGGGTTGIVDYTNYEDMKYAIRKLDDSEFRN
AFSRAYIRVKEYDSRRSLSRSHSRSRSHSRTKSKSPSRSRSYSRSRSQSKSPKAKSSRRS
LSRSRSRSVSSRSHSGSRPRSLSRSPSRSKSPLPSSRSKRVSKSPKKQKSLSHSRSPSKS
RSRSLSRS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggtctcaggtagaatgagtggtcatttgagtagaaccatttacgttggcaacctccct
ggagatattcgtgagagagaaatagaagatcttttttataagtatgggcctattgttgat
attgacttgaagatcccgccaaggccaccaggttatgcctttgttgagtttgaagattct
cgagatgctgaagatgccattcgtagtcgtgacgggtataactttgatgggcatcggtta
agggtagaactggcacatggtgggcgtggccattcttcaacaatagatcgtcgtagtagt
catggcagcggtggcagccgtggaggagtctctaggcgttctgaataccgtgtgttagtc
acaggtttaccttcttctgcttcatggcaagacttaaaggatcacatgcgtcgagctggg
gacgtttgcttctctcaagtgttccgtgatggtggtggtacgactgggattgtggattac
acaaactatgaagacatgaaatatgctattaggaagctagatgactctgagtttcggaat
gcattttcccgtgcatatatacgagtgaaggagtacgactcaaggcggagcttatctagg
agccatagtcgtagccggtcccactcaagaactaaaagtaaaagccctagtcgcagtcgc
agttatagcagaagccggagccaaagtaaatccccaaaggccaagtcttctcgtcgttct
ttgtctagatctcgatcaaggtctgtttcttctcgctcccattcagggtcaagaccacgc
tctttgtcaagatctccatcaagatcgaaatctccattaccctcttctcgtagcaaacgt
gtgagcaaaagcccaaagaagcagaagagccttagtcatagccggagcccaagcaagagt
cgtagccgcagcttatctcggtcttga
DBGET
integrated database retrieval system
