Nelumbo nucifera (sacred lotus): 104599013
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Entry
104599013 CDS
T04131
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03013
Nucleocytoplasmic transport
nnu03015
mRNA surveillance pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104599013
09122 Translation
03013 Nucleocytoplasmic transport
104599013
03015 mRNA surveillance pathway
104599013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104599013
03041 Spliceosome [BR:
nnu03041
]
104599013
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104599013
Spliceosome [BR:
nnu03041
]
Common components
Common spliceosomal components
Cap binding complex
104599013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
CCDC93_CC
DUF7436
TPR_MLP1_2
Csm1_N
DUF5798
LPP
Motif
Other DBs
NCBI-GeneID:
104599013
NCBI-ProteinID:
XP_010259677
UniProt:
A0A1U8A4C5
A0A822Z4U2
LinkDB
All DBs
Position
Un
AA seq
863 aa
AA seq
DB search
MSSWRTLLLRIGDKCPEYGGNSDFKEHIETCYGVLWRELEHSGDDILDFLLQCAEQLPHK
IPLYGTLVGLLNLENEDFAKRVVETTHTNLQDALDSGNCDRIRILMRFLTVLMCSKVLQP
GSIVVVFETLLSSAATTIDEENGNPSWQACADFYITCILSCLPWGGAELIEQVPEEIERV
MVGIEAYLSIRKRTCDVGFSVFELDDENQNVRDEKDFLEDLWDRIQALSSNGWKPDSVPR
PHLSFEAQLVGGKSHDFAPISCPDHPQPPSTLSGITCGKQRHEAELKYPRRLRRLNIFPA
SKTEDLQPIDRFVVEEYLLDVLLFLNGCRKECASCMVGLPVSFRYEYLMAETIFSQLLLL
PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFERIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPKWTPQRVFVQEVLEREVRLSYWEKIRQTIENASALEELLPPK
GGSNFKYSEDGGEGTKEHELSVELNSMVKGKSVARQIISWVEETIIPVHGFKVALEVIIQ
TLLDIGSKSFTHLITVLERYGQVIAKLCPDQDKQMMLIDEVSFFWKNNAQMTAITIDRMM
GYRLISNLAIVEWVFSPANIEQFHSSDRPWEILRNAINKTYNRISDLREEISSLKKSVVS
SEEAAAKAQEELEAAESKLTVVNGEPVLGENPARLKRLKSFAEKAKEQEVSVRDSLEAKE
ALLARALDENQVLFVSLYKNFLNVLMERLPNAFDEEMKGGLRPTQTDAMAVDPDETSTMD
VDKENGNPKSQANGERAGSGYNIGEKEQWCLSTLGYMRAFSRQYATEIWPHIEKLDTEVF
TEDCHPLIRKAVYSGLRRSIHEG
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctggcggactcttttgctgaggatcggcgataaatgccccgaatacggcgga
aactctgatttcaaagaacacattgaaacatgctacggcgtactgtggcgcgagttggag
cactctggagacgatattttggactttcttctccagtgtgctgaacaattgcctcataag
attcctctgtatgggacactggttggtttgttgaatctggaaaatgaggactttgctaaa
agagtagtggagactactcatactaatttgcaggatgcattagattctggaaattgtgat
aggattcgtattttgatgcggttcctgacagtactgatgtgcagcaaggtccttcaacca
ggttcaatagtggtggtctttgaaacactattatcatcagctgccacaacaattgatgaa
gagaatggaaatccttcttggcaagcatgtgctgatttttatataacatgcattttatca
tgtctcccttggggaggggcggagttgattgagcaagttcctgaggagattgagagagtc
atggttggcatagaagcttatttgagcatcagaaaacgcacatgtgatgttgggttctca
gtttttgagcttgatgatgaaaatcagaatgttcgtgatgaaaaggactttttagaagat
ttatgggatcgaatacaagctttatccagcaatggatggaagcctgatagtgttcccaga
cctcacctttcgtttgaagctcagttggttggtgggaagtctcatgattttgctcctatc
agctgtcctgaccatcctcagcccccttctacactttctgggattacctgtggcaaacaa
aggcatgaagctgaattgaagtatccccgaagacttcgcaggcttaatatatttcctgca
agcaaaactgaggatctacagcccatagatcgctttgttgtggaagagtatttactagat
gttcttctctttctcaatggctgtcgcaaagaatgtgcatcatgtatggttggccttcct
gtttcattccggtatgagtatctgatggcagagacaattttctcccagctacttttacta
ccacaacccccattcaagcccatatactacacattggttattattgacctctgtaaggct
cttccaggggcttttccagcagttgtagctggtgctgttcgtgctcttttcgaaagaatt
gctgatttagatatggaatgccgaacacgtctcatcctatggttctcgcaccacctatca
aactttcagtttatttggccatgggaagaatgggcatatgtgttagacctcccaaaatgg
actccccaaagggtgtttgttcaggaagtactggaaagagaagtccgtttatcatactgg
gagaaaatcaggcagaccatcgagaatgcctctgcattggaagagctacttcctcccaag
ggtggatcaaacttcaaatacagtgaggatgggggagaaggaacaaaagaacatgaactt
tcagttgagttgaatagtatggtgaaaggaaaatcagtagcccgtcaaattatttcatgg
gtagaagagactataatcccagttcatggcttcaaagttgcacttgaagtcatcattcaa
acccttcttgacattgggtcaaaaagttttactcatctaatcactgtattggagaggtat
ggccaagtcattgcaaagctatgtcctgatcaagataagcaaatgatgttaatagatgaa
gttagttttttctggaaaaacaatgcccagatgacagctattaccattgaccgtatgatg
ggttaccggcttatatctaatttggccattgtagaatgggttttctctccagctaacatt
gagcaatttcattcatcagatcgtccatgggagattcttagaaatgcaatcaacaaaaca
tataatcgcatctctgatctaagggaagagatttcatcccttaagaagagtgttgtatca
tctgaggaagctgcagcaaaggctcaagaggaattagaggctgctgagtcgaagcttaca
gttgtgaatggtgaacctgtactaggtgaaaatcctgcaaggttaaagcgcttgaaatca
tttgctgagaaagcaaaagagcaagaagtatctgttcgggactctttagaggctaaggaa
gctctccttgctagagcccttgatgaaaatcaggtgttattcgtctctctgtataagaac
tttttaaatgtgctcatggaacgtctgcctaatgcatttgatgaagaaatgaaggggggt
ctacggcctactcagacagatgcaatggctgttgacccagatgaaacatccacaatggat
gtggacaaagaaaatggaaatcctaaaagtcaagcaaatggggaaagagcaggcagtggc
tacaatattggggagaaagaacaatggtgtttatcaaccttgggttatatgagggccttt
tcaagacaatatgctactgagatatggcctcacattgagaagctggacacagaggtattt
acggaagactgtcacccacttatccgaaaagcggtttactcgggtttgcgtcgatcaatc
catgaaggatga
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