Nelumbo nucifera (sacred lotus): 104599257
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Entry
104599257 CDS
T04131
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104599257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104599257
03041 Spliceosome [BR:
nnu03041
]
104599257
03036 Chromosome and associated proteins [BR:
nnu03036
]
104599257
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104599257
Spliceosome [BR:
nnu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104599257
Complex B
104599257
Complex C
U2 SnRNP specific factors
104599257
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
104599257
TFTC complex
104599257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
104599257
NCBI-ProteinID:
XP_010260027
UniProt:
A0A1U7ZZK8
A0A822Y703
LinkDB
All DBs
Position
Un
AA seq
1215 aa
AA seq
DB search
MYLYSLTLQKATGIVAAANGNFVGGKSQEIVVARGKVLDLLRPDENGKIQTILSVEVFGT
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNIFDKIHQETFGKSGCRRIVPGQYL
AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSVAGVDCGFDNPI
FAAIELDYSEADQDSSGVAASDAQKHLTFYELDLGLNHVSRKWSEPIDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLVVSAATHKQKSMFFFLLQ
TEYGDIFKVTLDYENEHVKELKIKYFDTMPVTASMCVLKSGFLFAASEFGNHALYQFKSI
GDDEDVESSSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVINLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSQLPGIPSAVWTVKKNVNDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLLGDDSLMQVHPNGIRHIREDGRINEWKTPGKR
TIVKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLLLEVQASVGGEDGADHPASVFL
NAGLQNGVLFRTVVDMVTGQLSDTRSRFLGLRAPKLFSSIVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYTP
RKFVLHPKRKLLVVIESDQGALTAEEREAARKECLEAAGMGEKGNGNVEQMENGGGDDEE
KDDPLSDEQYGYPKAESDKWVSCIRVLDPRTASTTCLLELQDNEAAFSVCTVNFHDKEYG
TLLAVGTAKGLQFWPKRKFTAGFIHIYRFVEDGKVLQLLHKTQVDGIPLVLCQFQGRLLA
GIGPVLRLYDLGKRRLLRKCENKLFPNTIISIHTYRDRIYVGDIQESFHYCKYRRDENQL
YIFADDCVPRWLTASYHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGKIKWEQGK
LNGAPNKVEEIVQFHVGDVVTSLQKASLIPGGGECIIFGTVMGSLGALLAFTSREDVDFF
SHLEMHMRQEHPPLCGRDHMTYRSAYFPVKDVIDGDLCEQFPTLPPDLQRKIADELDRTP
GEIMKKLEDIRNKII
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatacagtctaacactgcaaaaagcaactggtatcgtcgctgcggctaatgga
aacttcgtcggtggtaagtcgcaagaaattgttgtagcgagaggaaaagttctcgatcta
ttgcgtcccgacgaaaatggtaagatccagacaattctatccgtcgaggtatttggcaca
atccgttcattagctcagtttaggcttactggttctcagaaagactatattgttgttggg
tctgattcgggtcgaatcgtgattctagagtataacaaagagaaaaatattttcgacaaa
attcatcaagaaacgtttgggaaatcgggttgtcgtcggattgtcccggggcagtacttg
gctgttgatcccaagggccgtgcggtaatgattggtgcctgtgaaaagcagaaacttgtt
tatgtcttaaacagagatactgctgcaaggctgacaatttcatccccattagaagcccat
aaatctcacaccatcgtttattctgttgctggggttgactgtggttttgacaacccaatt
tttgctgcaattgaacttgattattcggaagcggatcaggattcaagtggagtggctgct
agtgatgctcaaaagcatctcactttctatgaacttgatcttggtcttaatcatgtttca
agaaaatggtcggaaccgattgacaatggcgccaacatgctcgtcacagttcctggaggt
ggggatggccccagtggtgtccttgtgtgtgcagagaattttgtcatttataaaaatcag
ggccatcctgatgtccgagctgtcatccctagaagggcagatttgcctgctgagcgtggg
gtgctcgtagtttctgctgccacgcacaagcagaagtccatgttcttctttctgttgcag
acagagtatggagatatatttaaggttacactggactacgagaatgaacatgtgaaagag
ttgaagatcaagtattttgacacaatgcctgttacggcctctatgtgtgttctgaagtca
gggttcctatttgctgcttcagagtttgggaatcatgctttatatcagtttaagtcaata
ggagatgatgaagatgtggaatcatcatcagctacattaatggaaacggaagaaggtttt
cagccagtatttttccagcctaggggccttaagaatcttgttaggattgatcaagttgaa
agtttgatgccaattatggacatgaaagttataaatttgtttgaagaagagactcctcag
atatttacactttgtgggcgaggtccacgttcgtctttacgaatactaagaccaggtttg
gccattagcgagatggctgtctcacaactccctggtatcccaagtgctgtttggacagtg
aagaagaacgttaatgatgagtttgatgcatacattgttgtgtcctttgcaaatgctact
ctggtgctttcaattggtgagactgtcgaagaagttagtgatagtggattccttgatact
accccatctcttgctgtttctctattaggggatgactctctgatgcaagtccacccaaat
ggcattaggcatataagagaagatgggcgtataaatgagtggaaaactcctgggaagagg
acaattgtgaaggttggctccaacagacttcaagttgtaattgctctgagtggaggagag
cttatctattttgagatggacatgacaggtcagttgatggaggttgagaagcatgaaatg
tctggggatgtggcttgtctggacattgctccagttcctgaagggagacaaaggtcccgt
ttccttgctgtaggatcctatgataatactattcgtatcctatccttggaccctgatgac
tgcatgcagattttaagtgtgcagagtgtatcttcacccccagaatctcttctcttactt
gaagttcaggcgtcagttggtggggaggatggtgctgatcaccctgccagtgtttttctt
aatgctggtctacagaatggggtgctcttcagaactgtggttgatatggtgacaggtcag
ctttctgatactcgctcccggttcttgggactcagagccccaaaactcttctcttccatt
gtaagaggtaggcgagcaatgctttgcttgtctagtcgaccttggcttgggtatattcac
caaggacacttcttgttgactcccctttcatatgagactcttgaatatgctgcctcgttt
tcatctgatcagtgtgcagaaggtgtggttgctgttgcaggggatgcattgagggttttc
acaattgagaggttgggagaaacattcaatgaaactgcaattcctttgagatatactcca
aggaagtttgtccttcatcccaagcggaaactgctggtggtgattgagagtgatcaggga
gcactcactgcagaagaacgtgaagctgcaaggaaggaatgtctggaggccgctgggatg
ggagagaaaggaaatggtaatgtggaacagatggaaaatggtggtggtgatgatgaggaa
aaggatgatcccctatctgatgagcagtatggttacccaaaggcagagtctgacaagtgg
gtgtcttgtatcagagtccttgatcctaggacagcaagcacaacatgccttttagagctt
caggacaatgaggctgcatttagtgtatgcactgtgaatttccatgacaaggaatatgga
actcttttggctgttggtaccgcaaagggactgcagttttggcctaagagaaagttcact
gcgggatttatacatatttataggtttgtggaagatggtaaagttcttcaacttttacac
aagacacaagtagacggtattcctcttgttttgtgccaattccaaggaagattgcttgct
ggaataggaccagtactcagattatatgatttggggaagaggagattgcttagaaaatgt
gagaataagctcttccccaacacaattatctccatccacacatatagggatcggatttat
gttggcgacatacaagagtcattccattattgcaagtataggcgggatgaaaatcagttg
tatatatttgcagacgattgtgttcctagatggcttacagcatcataccacatagacttc
gacaccatggccggtgctgacaagtttgggaatgtgtactttgtgcggttaccacaggat
gtgtcagatgaaattgaagaagatccaactggaggtaaaataaagtgggagcaggggaag
ctgaatggagcccctaacaaggttgaagaaattgtacagttccatgtgggtgatgtagtc
acatctttgcagaaggcatctcttattccagggggtggtgaatgcattatttttggtact
gtaatggggagcttgggggctttgcttgctttcacgtctagggaggatgttgacttcttc
tctcacttagagatgcatatgaggcaggagcatccacctctgtgtggtagagatcacatg
acctacagatctgcttactttccagtgaaggacgtgattgatggagatctctgtgaacag
ttccccacactacctccggatttgcagaggaagattgcagatgaactggataggacccct
ggggaaataatgaagaaactcgaagatattagaaataagatcatttga
DBGET
integrated database retrieval system
