KEGG   Nelumbo nucifera (sacred lotus): 104600047
Entry
104600047         CDS       T04131                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104600047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104600047
   03041 Spliceosome [BR:nnu03041]
    104600047
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104600047
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104600047
Spliceosome [BR:nnu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104600047
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 RRM_11 RRM_3
Other DBs
NCBI-GeneID: 104600047
NCBI-ProteinID: XP_019053777
UniProt: A0A1U8Q5A3
LinkDB
Position
Un
AA seq 445 aa
MAKKRKVERELDLLGAEPDANGSDEEAGEEEEEEEDITKVLEPFNKEQLIDLLRWAASND
PKVRDEINRVADRDPVHRKLFVHGLGWETTSEKLREFFSQYGELEDCNVVVDKATGKSKG
YGFLLFKHRRGATKALKEPQKKIESRMTACQLASTGPVNPSHSNPSTHAQQSQQTHLGYH
PSQDTLARKIYVGNVHSDIPSDKLLAFFSKYGEIEEGPLGFDKQTGKSKGFALFIYKTTE
GARKALEEPNKSFDGHQLYCQKATDSHKLRAAAAAASASGNAPSSGGFSAPSGGGFNAPG
GIGFGGLGGAGFNASDGSMAHQVSAAPAALLGQGLLAGGLPFGQGIPPNQAALALLAAAG
QNPAAFGVPPAVIASLNPALAAAMNAGPQPVAPSTMPQTMTGYGMGNPGYQNPQTHQANN
YQSGPMGQGPAPHSAMGTMGGYVAR
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggccaagaaacgaaaggtcgagagagagcttgacttgttaggcgccgagcctgacgca
aatggttccgacgaggaggcaggagaagaagaggaggaggaagaagatatcacgaaggtt
ctcgaacccttcaacaaagaacaactcatcgatcttcttcgctgggccgcgtcgaacgat
cccaaagttcgcgacgagatcaaccgagttgcagaccgcgacccagtccaccgtaagctc
ttcgtccatgggcttggttgggaaaccacctcggagaagctccgggagtttttctcccag
tatggtgagctcgaagactgcaacgtcgtcgttgataaagctactggtaaatcgaagggc
tatggattcttactctttaagcaccgtcgtggcgcaacaaaagccctgaaagagcctcag
aagaagattgagagtcggatgaccgcgtgccaacttgcgtcgaccggtcctgtcaatcct
tctcattcgaatccgagcacgcacgcccagcaatcgcagcagacgcatctgggctatcat
ccatcacaagatacgctagcaaggaagatttatgtgggtaacgtacattccgatattcct
tctgataaattgctcgctttcttctccaagtatggcgaaattgaagagggtccgctaggt
ttcgataaacagactgggaaatctaaaggatttgcacttttcatttataagactactgaa
ggggcgagaaaggcattagaagaaccaaataagagctttgatgggcaccagttgtattgc
cagaaggcgaccgatagccacaagctcagggccgctgctgctgcagcttctgcgtctggg
aatgcacctagtagtggtgggtttagtgcaccgagtggcggtgggttcaatgccccgggt
ggtattggtttcgggggtctaggtggtgctggtttcaatgcttcagatggttctatggct
caccaagtttccgcagctcctgctgctttattaggtcagggtcttctagcaggtggcctt
ccatttggccagggcatcccaccgaatcaggcggctcttgctttactggctgctgctggg
cagaatcctgctgcatttggagttcctccagctgttattgcatcgttaaaccccgccttg
gcagccgcgatgaatgcaggcccccaaccagtggcaccatcaacaatgccccagacaatg
acaggttatggaatggggaacccagggtatcagaacccacaaactcatcaggctaacaac
tatcagagtggcccaatggggcaaggccccgccccacattctgctatgggaaccatggga
ggatatgtagcacgctag

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