KEGG   Nelumbo nucifera (sacred lotus): 104600050
Entry
104600050         CDS       T04131                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104600050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104600050
   03041 Spliceosome [BR:nnu03041]
    104600050
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104600050
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104600050
Spliceosome [BR:nnu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104600050
SSDB
Motif
Pfam: RRM_1 RRM_7 HEM4 FANCI_S1-cap
Other DBs
NCBI-GeneID: 104600050
NCBI-ProteinID: XP_010261157
UniProt: A0A1U8AFK6
LinkDB
Position
Un
AA seq 404 aa
MARNKNKRRKLAKKSENKAGNKNEPEKAPAAVNEDDSDSASSEPEPDSEKVQKLLEPYTK
DQLIEFICDAAVKDASLLQRIRSIADCDVSHRKIFVHGLGWDTTRETLISAFQPFGEIED
CNVVMDRATGKAKGYGFVLFTSRAGATNALKQPQKKINNRVTSCQLASVGPVTSQQTQDT
TGRKIYISNVHSDADPEKLRAFFAKFGEIENGPLGFDLLTGKSRGFAMFVYKTQEGARKA
LEEPYKMFEGHQLHCQRAIENKNKPAAQAVQAPVLAAVAAAQNLALFSQHPSLNPLYGGL
LGNPTAGLVGGSINPLVAGALNPAVVPSAQVAGTSLGNAVGLGGYDASSHGLGSLSGSAS
LLGAYGSASALQGLQSYQTSQLGQSSSARTYPTGGTLTGYPSYR
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggccagaaacaagaacaagaggagaaagcttgcgaagaaatcagagaacaaagctgga
aacaaaaatgagcccgagaaagctccagctgccgtaaacgaggatgattccgatagtgca
tcgtcggaacctgaaccagattccgagaaggttcagaaattgctagaaccatacacgaaa
gaccagttgatcgaatttatctgcgacgctgcagttaaagatgcttctcttctccaacga
attcgctctattgccgattgtgacgtttcacatcgcaaaatcttcgttcatggtctcggc
tgggacaccacccgtgaaaccctcatttctgcgttccagccgttcggtgagatcgaggac
tgtaacgtcgtcatggatcgagccactggtaaggccaagggttacggcttcgttctattt
acgtctcgggcgggcgcaacgaatgcactgaagcaaccgcaaaagaagatcaataatcgc
gttacatcatgtcaattagcttccgttggtcccgttacttcgcagcagactcaggataca
acaggtcggaagatttatatcagcaatgttcattccgatgccgacccggagaagcttcgg
gcgttctttgccaagtttggcgagattgagaatgggcccttggggttcgacttacttact
ggaaaatcaaggggatttgctatgtttgtctataaaacgcaagagggagcaaggaaggcg
ctcgaggaaccttacaaaatgtttgagggacatcaattacattgtcagagggcaatcgag
aacaagaataagcctgcagcacaggccgtgcaggccccagtattggctgctgttgcagct
gcccagaacttggctctgttcagccaacatccttctcttaatcctttgtatggcgggttg
cttggaaaccccacagccgggttggttggaggctctatcaatccgttggtggcaggggct
ttgaatcctgctgttgtaccatccgctcaagtggcggggacttccttagggaatgcagtg
ggactaggggggtatgatgcatcatcacatgggttgggtagtttgagtggcagcgcttcg
ttgcttggggcgtatggttctgcgtcagcattgcagggtctacaatcttaccaaacttct
caacttgggcagtcatcttctgcgaggacttatcccaccggcgggactttgaccggttat
ccatcttacagatga

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