Nelumbo nucifera (sacred lotus): 104600140
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Entry
104600140 CDS
T04131
Name
(RefSeq) uncharacterized LOC104600140
KO
K14311
nuclear pore complex protein Nup188
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104600140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104600140
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104600140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribo_biogen_C
LAP2alpha
Motif
Other DBs
NCBI-GeneID:
104600140
NCBI-ProteinID:
XP_010261283
UniProt:
A0A1U8A868
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All DBs
Position
Un
AA seq
1968 aa
AA seq
DB search
MASAAAAIDLAATPKSVDESLWWDSFVLLLNDLENAPLSLELPLSLVKKLKNNHSWFLDT
VSLFKPPNQTSRAALDSHKVDVGSHRLIIQPQLKDVALHVSSCLCLDEVQSYILVKQSVE
RDNMAADLKNQEFVHWILLQYYIERQCLLKCTRQILMHALYIGNVSKDGNAVQEEALKLF
ADGLERKLLSVLQNLLSSKYPEHMEIDLATLWAEETLIEDSLVLDILFLAYYESFCACNG
EQWKNLCLLYKGVLSGSFNFAMLTLSIEARNSLYHAKVQLLLILIETLDLESLLQMVHDE
VPFRQGHSVFSLKDVQVMDSVISSFNVLETGEASPLILAWAVFLCLISSLPEKQDNNVLM
EIDHAGYVRQAFEAAPLNYFLEILENDILKDSDGPISGYRSVLRTFISAFIASYEITLQI
EDDTLKLILDILCKIYHGEESLCVQFWDRDSFIDGPIRCLLCTLEGEFPFRTVELVRFLS
ALCEGTWPSKCVYNFLEKSVGISTLFEIPGDIENISQIIETYWPLHVPGVEGLLIPSQTH
GHILKIIERNTALVRWECAQSGVLVLLLRLAREFYFSRHEEVLVILDLLCRLASFSKAVC
FSLLDIGNSSPVQAARTSGHIEESLRVDVVEIICTLVKNLSPDGSGAKLMALSITIMANM
LKCSPSHVAVVALKSNILDVALRINSFEENSNVSSGRWCLSGGLARMLLIDCEQNEECCQ
LTISVLDFTMRLLETGAQDDAVLALVVFCLQYVFVNHEYWKYKLKHFRWKVTIKVLEVMK
KCITSIPHLQKLGHVIRNILLSDSSIHNTLFRIMCITTHTVERLYIIRLYELKEIEGLQL
AVCSVLDIVSTMLNDLSKDISFSLPVFHQAILSSVTKPIPVVKAVISLISFFRDQAIQVG
AARVLSMLCTIADNAQPYLFGNICLASDDMQIMDLRYSISDILCEGTPRNEDLFVAILKL
LTSAATFQPAFLVSVIATKENMEDQLSLSGDLKRQAKEASFGSLRPSKASIIDALFQHVK
KTDVLIESHPYLLLHVLKFLKALWQGATQYVQILELFKTSDNFWKLLSSSISAVATTSTP
LEDLSGVANLSLAYKYECHSVALDIIAHEMYLQEKLQQAEVSAKQSSEPSKERIENTVSK
EKSGSASLTDLMDILSTWCKSPVLGNLIKLYATSGFHSKVFLHSKIASSLFIVHVMGKLT
TGNSGSLSLSLTEKIRNMYKQLKEQSAFSELLAQYSVRGYSEGKELETLILSDLYYHLEG
ELEGRTMSPGPFKDLSQYLIESNLLQINEQMDRGDFYSASNCAFLYDLVLLQVDMGLEFW
DHSEWKASKPIAERMLSYMQNANSMAFLANSKLSALKALTAMLCVYEENSTEVKRKHIDR
GISEQLCESCINHICNDLQRTVKAIDLSSDVSEDILNFVSAQTELLLHLMRSLFRKLSPT
VNRQMYVSICKLVSKTSGTVLRVLSDLRTSSTVVKGAMKLVLMLLLTSIKSSYSNSCVRE
KLDTGSIEAFTEVSLVSLGLLPILCNFIETVEYCTLTIATIDLMLNSFLTSDTWLPIIQK
HLRLQFLVQKLQERDSFASIPIILKFLLTLAQVRGGAEMLQNANVFSSLKALFALLLDGN
HILNIQGNNGFATSLDKDEKPQYIWGLGLAVVTAMINSLGDSSSCDDMMDGLISYFFCEQ
FHLVSYYLNAPDFSSDGHDKKRARTQKTQTSLAALKETEHTLMLICMLAKHRNWVKAMKE
MDSQLRERCIHLLAFISKGAQRLGEHSSRTSPLMCPPILKEEVESNKKPSFLESRSGWFG
LSLLGCATKTEVSDAVAIQIYKIAFLLLEFLCLQVEGAAKRAEEVGYIDLAHFPELPMPE
ILHGLQDQVVAIVTELCEAHKSKPIQPEIQGVCFLMLQIMEKALYLEFGVSQTCGIRPVL
GRVEDFSRGIKLLMQAAETNSFLKTSIKDLKQIISLMYPGVVQAEGFL
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgctgcagcagccattgacctggccgcgacccccaagtctgtcgacgagtct
ctttggtgggactctttcgtccttctcttgaatgacctcgaaaacgcccctctatcgctc
gagcttccgctctctctggtaaagaagttgaaaaacaatcactcttggttcttggatacg
gtttccctttttaagcccccgaaccagacatctagggctgctctggattcccataaagtt
gatgtaggctcacatcggttgatcatacaacctcaattgaaagatgtggctttacatgtt
agctcttgtctgtgtctagatgaggtgcaatcatacattcttgtcaaacaatctgttgaa
cgtgataatatggctgcagatttgaaaaatcaagaatttgtgcattggatactacttcaa
tactacattgagcgacagtgcttgctgaagtgtacaaggcaaattcttatgcatgcttta
tacattggaaatgtatccaaagatggtaatgccgttcaagaggaggcactgaagctgttt
gctgatggattagaacgaaagttattatccgttcttcagaaccttctatcctccaaatat
ccagaacatatggaaattgaccttgccactttgtgggctgaagagactctgattgaagat
agtttggtcttggacattcttttcctcgcttattacgagtcattttgtgcttgtaatggt
gaacaatggaagaatttgtgtttgctttacaagggtgtcttatctgggtcttttaacttt
gcaatgttgacattatcaattgaagcaagaaattctttatatcatgctaaagttcagcta
ctgctaattcttattgaaaccttggacctggaaagtcttcttcaaatggttcatgatgaa
gtgcctttcaggcagggtcactctgttttttccttgaaggatgtccaagtgatggattct
gtgatttcaagtttcaatgttcttgagacaggagaagcaagtcctttgatacttgcatgg
gctgtattcctctgtttaatttcctcacttcctgaaaaacaagataataatgtgctcatg
gagattgatcatgcggggtatgttcgccaagcttttgaggccgcaccattgaattatttt
cttgaaattcttgagaatgatattttgaaggattcagatggtcctattagtggttatcga
agtgtcttgaggacattcatttctgcatttattgcatcttatgagattacacttcagata
gaagatgatacccttaagttgattttggatatcctctgcaaaatttatcacggagaggag
tcactttgtgttcaattttgggatagagacagttttatagatggtcctattcggtgtctt
ctttgcactttagagggtgagttcccatttcgaactgttgaactggttcgcttcttatct
gccctctgcgaaggaacatggccttctaaatgtgtgtataactttttagaaaagtcagtt
ggtatatcaacattgtttgagatccctggtgatatagaaaacatttctcagatcatagag
acatactggccgctgcatgttcctggggttgaaggccttctgattcctagtcaaactcat
ggtcacattttgaaaatcattgaaagaaatactgctcttgttcgttgggagtgtgcacaa
tctggagtgttagtgttgctcctgcgtttggcccgggagttctattttagcagacatgag
gaagtacttgttattcttgaccttctttgtcgactggcgtcctttagcaaggctgtatgt
ttttcattgttggacattggtaattcatctccagttcaagcagctcgcacaagtgggcat
atagaagagagtttacgggttgatgttgttgagattatctgcactttggtaaaaaattta
tcgcctgatggtagtggtgcaaaactgatggccttgagcattactataatggcgaacatg
ttgaagtgctctccatctcatgttgctgtggtggctctaaagtcaaatatacttgatgtg
gccctgaggataaatagttttgaagagaacagtaatgtgtcaagtggcagatggtgtctg
tcgggtggacttgcaagaatgctcttaattgattgtgaacagaatgaggaatgttgccaa
ttgactatttcagttctggatttcacaatgaggcttttggaaacgggagctcaggatgat
gctgtgttagctctagttgttttttgccttcagtatgtttttgttaatcatgagtactgg
aaatacaagttgaagcattttcgttggaaagtgacaatcaaggtacttgaagttatgaag
aaatgcattacatcaattccccacttacagaagctgggccatgttatcagaaatatctta
ctttctgattcctccattcataacacacttttccggattatgtgtataactactcataca
gtggagagactgtatatcatccgtctttatgaactgaaggagattgaaggtttacagctt
gcagtatgttctgttttagatattgtgtcaaccatgctcaacgacctttccaaggatatt
tcattcagtttgccagtctttcaccaagcaattttgtcatctgtgaccaagccaattcct
gttgtgaaagcagtgatatctttgatatccttcttcagggatcaggccatacaagtaggt
gctgcaagggttctttctatgttatgcaccattgcagataatgcacaaccatatttgttt
gggaacatatgccttgcttcagatgatatgcagatcatggatctaaggtattctatctct
gacatactatgtgagggaacaccaaggaatgaagatctgtttgttgctatacttaaactg
ctcacttctgcagcaacatttcagcctgcattccttgtttctgtgattgccactaaagag
aatatggaggaccaactgagtttgtctggagatttgaaacggcaagcaaaggaagcttct
tttgggtcattacgacctagcaaagcaagtatcatagatgcacttttccaacatgtcaaa
aaaactgatgttcttattgagagccatccctatttactgttgcatgtgctgaagtttctg
aaagcattgtggcaaggagccactcaatatgtgcaaatcctagagttgttcaagacatct
gataacttctggaaattgttgtcatcatccatttcagcagttgctaccacaagtactccc
cttgaagatttgtctggagttgcaaatctaagcttggcatacaagtatgaatgccattct
gtagcactggatattattgcgcatgaaatgtatttgcaggaaaaactacaacaagcggaa
gtgtctgcaaaacagtcttctgaaccctctaaagaaagaatagaaaacacagttagtaaa
gaaaaatctggatctgctagtctcactgatcttatggatattttgtctacctggtgcaaa
agcccagttctgggcaacttgataaagttatatgcaacttctggatttcacagcaaagta
tttctccattcaaagattgcttcaagcttgttcattgtgcatgtaatggggaaattaaca
actggtaattctgggagtttgtcattgtcattaactgagaagatacggaatatgtataaa
cagttgaaggaacaatctgcattttccgaactgttagctcagtattcagttcgaggttac
agtgaaggaaaggagctcgagactttaatactcagtgacctctactaccatctagaagga
gagctggaaggccgtactatgagtcctggacctttcaaagatctctctcagtatctaatt
gagtcaaatctcttgcaaattaatgagcaaatggacaggggggatttctactcggcttcc
aattgtgccttcctgtatgaccttgtgcttttacaagttgatatgggattggaattttgg
gatcattcagaatggaaggcatcaaaaccaattgctgaaaggatgttgagttacatgcag
aatgcaaactcgatggcgtttcttgcaaattccaagctttctgcgttaaaggcattgaca
gccatgttatgtgtgtatgaagaaaattctactgaggtaaagagaaagcatattgataga
ggaatctctgagcaactctgtgagtcatgtattaatcacatatgcaatgatttgcaaaga
acagttaaggcaatagatctatcttcagatgtttctgaggatatccttaattttgtctca
gcacaaactgaactactattacatctcatgagatctttatttagaaagctttccccaaca
gtcaacagacaaatgtatgtatctatctgtaaacttgtctcgaagacttcaggaactgtc
cttagagtattgagtgatctccggacatcaagtactgtggttaagggagcaatgaaactc
gtccttatgttgcttctcacatcaattaagtcaagctactctaattcatgtgtcagggaa
aagttggatacaggatctattgaagcttttactgaagtttctcttgtgagtcttggactg
ttacccattctttgtaactttattgaaacggtggagtattgcaccctcactattgcaaca
attgacctaatgctgaatagtttcctgacttctgatacttggttaccgatcatacaaaag
catctccggttacagtttcttgttcagaagctccaagaaagggattcttttgcttccatt
cccataattttgaaattccttttgacccttgctcaagtgagaggaggtgctgagatgctt
caaaatgccaatgttttctcatctctgaaagcgttatttgctctcttattggatgggaat
catatattaaatattcaaggcaacaatggttttgctacatcacttgacaaagatgaaaaa
cctcaatatatatgggggcttggcttggctgtggttacagcaatgattaattctttaggg
gacagttcttcttgtgatgatatgatggatggtttgatttcttacttcttctgtgagcaa
tttcatttggtttcttattatcttaatgcacctgacttctcatccgatggtcatgacaag
aaaagggcaaggacccagaaaacacaaacttctctagctgctctaaaagagacagaacat
actctgatgcttatctgtatgcttgcaaaacatagaaactgggttaaggccatgaaagaa
atggattcacaactaagggagagatgtattcatcttttggcctttattagcaaaggagct
cagcgccttggagaacattcaagtaggacatcacctcttatgtgccccccaatccttaaa
gaggaggttgaatctaacaaaaagccatcatttcttgaaagcagaagcggatggtttggt
ctttcccttcttggttgtgcaactaaaactgaggtttctgatgctgttgcaatacaaata
tataaaattgcttttctgcttctggaatttctttgtctccaagttgaaggagcagctaag
agggccgaggaagtggggtacattgatcttgcacatttccctgagcttcctatgcctgag
attctgcatggtttacaggatcaggttgttgctatcgttactgaactctgtgaagcccac
aagtccaagccaattcagccggaaatccagggcgtgtgtttcttgatgctgcaaataatg
gaaaaggcattgtacttggaatttggtgtctcacaaacttgtggtattagaccagtgctg
ggtcgtgttgaagacttctcaaggggaatcaaacttctgatgcaagcggcagaaacaaac
tcgtttttgaaaacatcaatcaaggacttgaaacagataatatcactcatgtatcctggt
gtagtgcaagccgagggtttcttgtaa
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