KEGG   Nelumbo nucifera (sacred lotus): 104600510
Entry
104600510         CDS       T04131                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104600510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104600510
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104600510
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104600510
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 104600510
NCBI-ProteinID: XP_010261783
UniProt: A0A1U8A3U7
LinkDB
Position
Un
AA seq 128 aa
MSWASLEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAADIRRAQKAERDATDLKGSMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaagcctggaagatatcttcctttccacatctcttgcgagctatcttgac
aagaaacttctcgttttgctgcgtgatggtcgaaaactcttggggatacttcggtcattt
gatcaatttgcaaatgccgttcttgaaggtgcatgtgagcgagtgattgttggtgatctt
tattgtgacattcccttgggcctctatgtaattcgtggggagaatgttgtcttaattggc
gaactggatcttgaaagggaggagcttcctccacatatgactcgtgtttcagctgcagac
attaggagggcacagaaggcagaaagggacgctacagatctgaaaggctccatgagaaag
agaatggaattccttgatttagattga

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