Nelumbo nucifera (sacred lotus): 104600510
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Entry
104600510 CDS
T04131
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104600510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104600510
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104600510
mRNA degradation factors
5'-3' decay
Lsm complex
104600510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
104600510
NCBI-ProteinID:
XP_010261783
UniProt:
A0A1U8A3U7
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All DBs
Position
Un
AA seq
128 aa
AA seq
DB search
MSWASLEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAADIRRAQKAERDATDLKGSMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaagcctggaagatatcttcctttccacatctcttgcgagctatcttgac
aagaaacttctcgttttgctgcgtgatggtcgaaaactcttggggatacttcggtcattt
gatcaatttgcaaatgccgttcttgaaggtgcatgtgagcgagtgattgttggtgatctt
tattgtgacattcccttgggcctctatgtaattcgtggggagaatgttgtcttaattggc
gaactggatcttgaaagggaggagcttcctccacatatgactcgtgtttcagctgcagac
attaggagggcacagaaggcagaaagggacgctacagatctgaaaggctccatgagaaag
agaatggaattccttgatttagattga
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