Nelumbo nucifera (sacred lotus): 104600598
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Entry
104600598 CDS
T04131
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03030
DNA replication
nnu03420
Nucleotide excision repair
nnu03430
Mismatch repair
nnu03440
Homologous recombination
nnu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104600598
03420 Nucleotide excision repair
104600598
03430 Mismatch repair
104600598
03440 Homologous recombination
104600598
03460 Fanconi anemia pathway
104600598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nnu03000
]
104600598
03032 DNA replication proteins [BR:
nnu03032
]
104600598
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104600598
Transcription factors [BR:
nnu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104600598
DNA replication proteins [BR:
nnu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104600598
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104600598
MMR (mismatch excision repair)
104600598
DSBR (double strand breaks repair)
HR (homologous recombination)
104600598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
OB_MEIOB_N
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
104600598
NCBI-ProteinID:
XP_010261942
UniProt:
A0A1U8A9S7
LinkDB
All DBs
Position
Un
AA seq
630 aa
AA seq
DB search
MPVYLTPNAIAAINSGDANSKPLVQVLEIKLIGNSQDRYRLLLSDSVSTQHAMLATQLND
RVKSGRVQKGSIVQLIDYICSTVQNRKIIVVLNMETIIPDCEIIGNPKLLMQSDSTSQKS
SSANKPEQPAIPDNRHLATTSCSNSAPKPGNKMPSFRPTVQPPYRPPPNYKNHGPIAKND
APARIIPISALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCF
NAVVDRFYDAIEVGKVYLISKGNLKPAQKNFNHLKNEWEIFLESSSTVELCPDEDGSIPK
QQFSFKPINEIESSENNSIIDVIGIVESVNPSVPILRKNGMETQRRILNLKDGSNRSVEL
TLWGELCNKQGRELQQMVESGVFPVLAVKAAKVNNFSGKSIGTISATQLFINPDCPEAYG
LRDWFDRGGKNTASQSISRDIMPGCPRNEVRKTVSQIKDEGLGRADKPDWVTVKATVSFI
KTDNFCYTACPLMIGDRQCSKKVTRSGNARWQCDRCTQEFEECDYRYLLQAQVQDHTGLT
WVTAFQESGEEILGCSAKELYLLKYEEQDDVRFGEVIRRSLFSEYLFRLKIKEEMYGEEQ
RVKITVVKAEKLNYSAESRFLLDLISRITC
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtatctcacgcccaacgcaattgcagccatcaatagtggcgatgcgaactca
aagcctcttgtacaagtcttggaaatcaagctcataggcaattcgcaggatcggtatcgt
cttctactctctgattccgtttccactcagcacgcaatgctggcgactcagctgaacgat
cgggtgaagagcgggagagtacagaaaggatccattgttcagctgatcgattacatctgc
agcactgttcagaatcgcaagattatcgtggtactgaacatggagactataatcccagat
tgtgagataattgggaacccgaaactgttgatgcaatctgactcgacatctcagaaatct
tcgtccgctaacaagcctgagcaaccagcaattcctgataacaggcatctcgcaacaact
tcctgtagtaactcagctccaaaacctggcaataagatgccgagctttcgtccaactgtc
caacctccataccgacctcctccaaattataaaaatcatggccctattgcaaagaatgat
gcacctgcacgaatcattccaatttctgctctgaatccttatcagggacgatgggcaatc
aaggccagagttaccgctaagggagatctccgtcgctacaataatgctaagggagatggg
aaagtcttctcctttgacctccttgactcggatggaggagaaataagggttacgtgcttc
aatgctgttgttgatcgcttctatgatgctattgaagttggtaaggtctatttgatatcc
aagggaaacttaaaacctgctcaaaagaacttcaaccatcttaagaatgaatgggagata
tttctagagtcaagctcaacagtcgaactttgcccagatgaagatggctcaataccaaag
caacagttctctttcaaacccatcaatgagattgagagttcagaaaacaattctataata
gatgtaattggtattgtagaatctgtcaatccttcagtccctatcctgagaaagaatggt
atggaaacccagagaagaattctgaatcttaaggatggatccaaccgcagtgttgagcta
accctctggggggagttgtgcaataaacaaggtcgagagctgcaacagatggttgaatct
ggggttttcccagttttagccgttaaggctgcaaaggtgaataacttcagtggtaaatca
ataggaacaatatctgccacccagctcttcataaatccagattgccctgaagcctatggt
ctgagagactggtttgacagagggggcaagaatactgcttctcagtccatctctagagat
attatgccagggtgtccaaggaatgaggtccgtaaaacagtatctcagataaaagatgaa
ggtcttggacgagctgataagccagattgggtcacggtgaaagcaactgtatcattcatc
aagacagataatttctgttacacagcttgcccgttgatgattggggacagacagtgtagt
aaaaaagtaacaagatcaggaaatgcaagatggcagtgtgatagatgcactcaagagttt
gaggagtgtgattacaggtatcttcttcaagctcaagtgcaagaccatacagggttgacc
tgggtgacagcattccaggaatcaggagaggagatcttgggttgttcagcaaaggagctg
tacttattgaaatatgaagagcaagacgatgttaggtttggggaggttatccgccgtagc
ctattcagtgagtatcttttcaggctcaaaatcaaagaagaaatgtatggtgaagagcaa
agggtgaagatcactgtcgttaaggcagagaaattgaactactctgcagagagtagattc
ctacttgatttgatttcaaggatcacatgctaa
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