Nelumbo nucifera (sacred lotus): 104600719
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Entry
104600719 CDS
T04131
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03082
ATP-dependent chromatin remodeling
nnu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104600719
03083 Polycomb repressive complex
104600719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nnu03036
]
104600719
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104600719
Histone modification proteins
HAT complexes
HATB complex
104600719
HDAC complexes
Sin3A-HDAC complex
104600719
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104600719
PRC2.2
104600719
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104600719
Heterochromatin formation proteins
Other heterochromatin formation proteins
104600719
Chromatin remodeling factors
NuRD complex
104600719
NuRF complex
104600719
NuRF complex (fruit fly)
104600719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
104600719
NCBI-ProteinID:
XP_010262125
UniProt:
A0A1U8A4Q6
LinkDB
All DBs
Position
Un
AA seq
465 aa
AA seq
DB search
MKERGKAGQPSVDERYTQWKSLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVLANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPKNTKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTE
PFVLSGGKDKSVVLWSIHDHITASAADTKSPGSGSSSIKHASKVGATDKAAESPAVGPRG
IYHGHDDTVEDVQFCPSSVQEFCSVGDDSCLILWDARTGTSPAIKVEKAHNADLHCVDWN
PHDENLILTGSADNSVRMFDRRNLTTGGVGSPVYKFEGHKAAVLCVQWSPDKASVFGSSA
EDGFLNVWDHEKVGKKKDRLGTRMPNSPPGLFFQHAGHRDKVVDFHWNATDPWTIVSVSD
DCESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHILSCSAKS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagagggaaagcaggacagccatcagtcgatgaaaggtacactcagtggaag
tcccttgttcccattctctacgactggcttgccaaccacaacctcgtctggccttctctc
tcttgccggtggggtccacaactggagcaggcgacttacaagaatcgccagcgtctttat
ctttctgaacagactgatggtagtgttccaaacactcttgtgttagcaaattgtgaagtt
gtaaaaccaagggttgctgcagcggagcacatatcacagttcaatgaagaagcacgttct
ccgtttgtaaagaagtttaaaaccattatacatcctggagaggtaaacagaataagggag
ctgccaaagaacactaagattgtggccacccataccgatagtcctgatgttctcatatgg
gatgttgaggctcaacctaatcgtcatgctgtactgggagctgctgactctcgtccagat
ctgatattgacagggcatcaagacaatgcagaatttgcacttgccatgtgcccaacagag
ccttttgtcctgtccggtggaaaagataagtcagttgttctttggagtattcatgatcat
atcactgcttcagcagcagacacaaaatccccaggttctgggagctcaagcattaaacat
gcctctaaggttggtgctactgataaagctgcagagagccctgctgttggaccacgtggt
atctatcatgggcatgatgatactgttgaagatgtgcagttctgtccatcaagtgtgcag
gagttctgtagtgtaggtgatgattcttgccttatactatgggatgcacgaactggtact
agtccagccatcaaggtcgagaaagctcataatgctgatctgcactgtgttgattggaat
ccgcatgatgaaaaccttattctaaccgggtcagctgataattctgttcgtatgtttgat
cggagaaacctgactactggtggtgtggggtcacctgtctataaatttgaaggccataaa
gctgctgttctttgtgttcagtggtctcccgacaaggcatctgtctttggcagttctgca
gaggatggtttcttaaatgtttgggatcatgagaaggttggtaaaaaaaaggaccgtctt
ggaacaaggatgccaaattctccaccaggcttgttttttcaacatgcagggcacagggat
aaagtggttgattttcattggaatgcaactgatccttggacaattgttagtgtttctgat
gattgtgaaagtactgggggtggtggaacattacagatatggcgcatgagtgatctgatt
tacaggccagaagaggaggttttggctgagcttgagaagttcaaatcgcacatactgtcg
tgctcagcaaagtcttga
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integrated database retrieval system
