KEGG   Nelumbo nucifera (sacred lotus): 104601762
Entry
104601762         CDS       T04131                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
nnu  Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nnu03009]
    104601762
Ribosome biogenesis [BR:nnu03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    104601762
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_EML NBCH_WD40 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_LRRK2 Beta-prop_IFT122_1st Beta-prop_WDR75_2nd WDR54 Beta-prop_WDR19_1st WD40_RFWD3 PEP5_VPS11_N Beta-prop_NUP159_NUP214 Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 104601762
NCBI-ProteinID: XP_010263521
UniProt: A0A1U8ALF7
LinkDB
Position
Un
AA seq 445 aa
MEVVIASSPVDAGIGCWDLHSGAEQLRYRSCTSTPHGLACVGQRFLASSQLRDSSSSSGS
ILYWSWSKPQVEVKSFPAEPIHPLVSNSDGMYIIGGGSSGAIYFWEVASGRLLKRWHAHY
RAVTCLFLSDDESLLVSGAEDGCIRVWSLFMVFDDIGMEMAKNPYEYSFSEHTLRVTDMV
SGYGGCNAIIVSASEDRTCKVWSLSRGKLLRSIDFPSIIEAVALDPGEHVFYAGARDGKI
YIASINAETTSSNSYGKHIIGTLSDNSKGVTCLAFSKDGILLVSGSEDGTIRVWDAKTHN
IVRIYRLAKGPVNNVLVVRRPLYSNRQTSENSHSSFSRRHAPLLPPPLGKYVNSTDENVD
SGAVSVPQTPSSDIMDAPYLSYHVLTKQISELQQQSSAATGMEVDRLNLDCKRSVEIVQK
WKEMFAYLHKFCVDELLGNDQTQTQ
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggaggtggtgatagcgtcgtctcccgtcgacgctgggattggttgctgggacttgcat
tcgggcgcagaacagctccgttaccgatcatgcacctctactcctcacggcctagcttgc
gttggtcaacgctttcttgcctcttcccagcttcgagactcctcttcgtcatcgggctcc
attctctactggtcctggagcaagcctcaagttgaagttaaaagttttcctgctgagcca
atccacccacttgtttccaatagtgatgggatgtatattattggaggaggttcatccggg
gcaatttacttttgggaggttgcaagtggcagacttcttaagaggtggcatgctcattac
agggctgttacttgcttatttttgtccgatgatgaatcccttttggtttctggggcagag
gatgggtgtatcagagtctggtctcttttcatggtttttgatgatatcggaatggaaatg
gcaaaaaacccatatgaatatagtttctctgagcacactctgcgtgtgactgatatggtt
tctggttatggaggatgtaatgcaatcattgtatctgcttctgaggatcgaacatgtaag
gtttggagcctatccaggggaaaattattgagatcgattgatttcccttctattattgaa
gcagttgcactagatcctggtgaacatgtattctatgctggtgctagggatgggaagata
tatattgcttctattaatgctgaaaccacttccagcaacagttatggaaagcatatcatt
ggcacattatctgataacagcaagggtgttacttgcttagcattcagcaaggatggaatc
cttttagtttctggatcagaggatggcacaattcgagtttgggatgctaaaacccataac
attgttcgaatttatagacttgccaaaggtcctgtgaacaatgttcttgttgttagacga
cccctctactcgaatcgtcagacatcagaaaattcacattcttccttttctagaaggcat
gctccactgttgccaccgccactgggaaaatatgtaaactcgacagatgaaaatgttgat
tcaggggctgtttctgtacctcagacacccagcagtgacataatggatgctccatatctc
agttatcatgttctgacgaagcaaatcagtgaacttcagcaacagagttctgctgccact
ggaatggaggtggataggttgaatcttgactgcaaaagatcagtggaaatagtacaaaaa
tggaaggaaatgtttgcataccttcataaattttgtgtagacgagcttttgggcaatgat
caaacacagacacagtga

DBGET integrated database retrieval system