Nelumbo nucifera (sacred lotus): 104602810
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Entry
104602810 CDS
T04131
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104602810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104602810
04121 Ubiquitin system [BR:
nnu04121
]
104602810
03036 Chromosome and associated proteins [BR:
nnu03036
]
104602810
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104602810
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104602810
Ubiquitin system [BR:
nnu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104602810
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104602810
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104602810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_6
zf-HC5HC2H_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_2
Prok-RING_4
RTT107_BRCT_5
PHD_NSD
zf-RING_10
PTCB-BRCT
zf-Nse
Motif
Other DBs
NCBI-GeneID:
104602810
NCBI-ProteinID:
XP_010264933
UniProt:
A0A1U8ADD6
LinkDB
All DBs
Position
Un
AA seq
710 aa
AA seq
DB search
MADSLNYSRFFNPWVLHFQKMGLELKCPLCLNLLNRPILMPCNHIFCSSCIPRSTDAGLH
CPVCKSPYADEDLRSASHMENIVNVYRSMDDAFRASLSHWSSQVVQPDVRKPSDGCPASD
KTDRGDKLRKEPAETIRRGSNGQSSIASLSPNKRTHVSPHHSEIKAEKSRDCVVRSFNRK
DASLTHEDTAASLRFCQFRGRQREEGQTQEMDLNQVAPTSPESLPSFGDAKDSDDDSSAQ
FSKHGTEKMREDVTRPEIDMGLPNHAKDYGRESKRKKLNYGHHDDAVQCLKFENISNSKS
QVKDEGPVSSPQPPAASERLDASSSAVCAFCQSSRTSQYVGPMLHYANGVPVAADDTKHS
NVIHAHRKCIEWAPQAYYEDENARNLESEVARGAKLKCSVCGLKGAALGCYAKSCRKTFH
VPCAVNTPGCRWDGDNYLMFCPAHSSFKFPSEKSKSRKAIKACDPWADEGDSNQANRSWV
TSADTCKRLVLCGSALSVGEKNLLNKFARITGATVSKIWIPNVTHVIAATDEIGACSRTL
KVLMAILNGRWILNIDWIKACMEAMDLVDEEPYEVNRDIHGCCDGPKNGRLRVVDNAPKL
FHGLKFCFSGDFVPSYKGYLEDLVKAAGGTLLEDKVSSVSQGSDALATPITLVVYSLDPP
QTCNLSEFSVIDKRCREAENLAAEIGAKVIGHTWLLESIAACKLQSIDLL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctctgaactacagtcgtttcttcaatccatgggtacttcacttccagaag
atgggtttggagctcaaatgccctctctgcttaaatttgctgaaccggccgatattgatg
ccctgcaatcacatattctgcagctcttgcattccaagatccacggatgctggtttgcac
tgccccgtctgtaaatcgccatatgctgatgaagatttaagatctgcttctcacatggaa
aatatagtaaacgtctatagaagtatggatgatgcgtttagggctagtctctcccattgg
tcctctcaagttgttcagccggatgtgcggaagccttccgatggatgcccggcttcagat
aaaacagataggggcgacaagttgaggaaggaaccagctgaaacaatccgaaggggaagc
aatggacaatcgtctatagcttcattatctcctaataaacgaactcatgtgtctccccat
cattcagaaatcaaagccgaaaaatctcgcgattgtgtggttaggagcttcaataggaaa
gatgcatcattgacccacgaagatactgctgcatcgttacggttctgtcagttcagaggc
agacagcgggaagagggacaaacccaagaaatggatctgaatcaggttgcaccgacgtca
cctgagagccttccatcctttggcgatgctaaggattctgatgatgacagttcagcacag
ttcagcaagcatggtactgaaaaaatgcgagaagatgttacaagacccgaaatagacatg
ggactgcctaatcacgctaaagattatggcagagagtcaaagagaaaaaagttgaactac
ggacatcatgatgatgctgtacagtgtttgaaatttgaaaatatttctaattccaaatct
caagttaaagatgaaggacctgtttccagtccacaaccacctgctgcttcagagaggttg
gatgcaagctcatctgcagtctgtgcattttgccagtcttctagaacttcgcagtatgtt
gggccaatgttgcattatgccaatggtgtgccagtagcagcagatgacacaaagcattcc
aacgtcattcatgcacacagaaaatgcattgagtgggcaccacaagcgtattatgaggat
gaaaatgctaggaatctagagtcagaagtagcaagaggtgcaaagctcaagtgcagtgtt
tgtggtctcaaaggggcagctcttggttgttatgcaaaatcctgcagaaaaacttttcat
gttccttgtgcagtgaatactccaggttgccggtgggatggtgataattatctgatgttt
tgcccagctcattcttccttcaagtttccaagtgaaaagtcaaagtcacgaaaggccatt
aaagcatgtgatccttgggctgatgaaggggatagtaatcaagctaacagatcctgggtc
acttcagctgatacgtgtaaaaggctggttctatgtggttctgctctttctgttggagag
aagaatctcttgaacaagtttgcaagaattactggtgcaactgtttctaagatttggata
ccaaatgtcactcatgtcattgcagccacagatgagataggtgcttgcagcaggacacta
aaagtactaatggcaatcctaaatgggagatggatactaaatattgattggataaaagca
tgcatggaagctatggatcttgtagatgaagagccttacgaagtgaaccgggatattcat
ggctgttgtgatggccccaaaaatggcaggctcagagtcgtggataatgccccaaagctc
tttcatgggctaaagttctgtttcagtggtgattttgttccctcttacaagggatacttg
gaggatttggtgaaggctgcagggggtactctcctggaggacaaggtcagctcagtctcg
caaggtagtgatgcacttgcaactccaataaccttggttgtgtacagccttgatcctcca
cagacttgcaatttaagcgagttttctgttatcgacaaaaggtgcagggaagcagaaaat
ttggctgctgaaattggtgctaaagtcattggtcatacatggcttttggaatcgatcgct
gcctgtaaattacaatccattgacttgctatag
DBGET
integrated database retrieval system
