Nelumbo nucifera (sacred lotus): 104602889
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Entry
104602889 CDS
T04131
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104602889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104602889
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104602889
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104602889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
MCR_alpha_N
Motif
Other DBs
NCBI-GeneID:
104602889
NCBI-ProteinID:
XP_010265048
UniProt:
A0A1U8ADN3
A0A822XR73
LinkDB
All DBs
Position
Un
AA seq
298 aa
AA seq
DB search
MSSGSVQIHHVWATNFDAEFHLLTQMLSYFSNVTIDTEFPGAIYPSRPPSFPSLQYSEKY
YQSLKANVDCMNLIQLGITLTDNYGRLPKFDDHYVVWEFNFRDFDVSTDLQAPEAIQLLR
SHGIDLEKTREHGIDSALFAQRMCESGLVHYDLASGTRLLHRSYYDIASGIRYLVRPRWI
CFQGGYDFAYLIKILSHGRPLPETINDFLDVMNHVFGAVFDVKHMMKCHGLYGGLERVAK
TLGVVRSVGQTHCSGSDSLLTWQIFEKLCKCFGKVDWSEAMGVIAGLECHALNRRLQL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggcagcgtacaaattcaccatgtttgggcgacgaattttgatgctgaattt
catcttctaactcagatgctatcatatttttcgaacgtcaccattgatacagagtttccg
ggcgctatatatccatccaggcccccctcctttccttccctgcaatattccgagaagtac
taccagtctctcaaagcaaatgttgattgtatgaatctcattcagctgggcatcactctc
accgacaactatggcagactccccaagtttgacgatcattacgtggtctgggagttcaat
tttagagatttcgatgtctccaccgacttacaagcgccagaagccatacaactcctcagg
agccatggaatcgatttggagaagaccagggagcacggcattgattcagcgctgtttgca
caacggatgtgcgagtctgggctagttcattacgacttggcttctgggactcgtcttcta
caccgttcatactacgacattgcatcaggtattcgctatctagtgcgaccgagatggata
tgtttccaaggaggctacgattttgcttacctgataaagatattgagccatgggagacca
ctgccggagacgataaatgattttcttgatgtgatgaatcatgtattcggggcagttttt
gatgtgaaacacatgatgaagtgtcatgggttgtatggagggctggaacgagttgcgaag
acgcttggcgtggttcgatcagtggggcagactcactgttctgggtctgatagcctcctc
acatggcagatttttgagaagttatgcaagtgttttggcaaggtcgactggtcggaggcg
atgggagttattgctgggctggagtgtcatgccttgaacaggagattgcagttgtaa
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