Nelumbo nucifera (sacred lotus): 104603050
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Entry
104603050 CDS
T04131
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104603050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104603050
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104603050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
104603050
NCBI-ProteinID:
XP_010265279
UniProt:
A0A822YC41
A0A1U8ACS8
LinkDB
All DBs
Position
Un
AA seq
942 aa
AA seq
DB search
MEENLQEPNKLPELKLDAKQAQGFISFFKTLPQDPRAIRFFDRRDYYTVHGENATFIAKT
YYHTTTALRQLGSGSDGISSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLTKSG
TPGNLGSFEDVLFANNEMLETPVIVALCLNFRESECTVGLGYVDLTKRVLGLAEFIDDSQ
FTNVESALVSLGCKECLLPMESGKSMENRTLHDALSKCGVLLTERKKTEFKSRDLVQDLS
RLVKGSIEPVRDLVASFEYATGALGALVSYADLLADESNYGNYTIQRYNLDSFMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLNRWLKQPLLDVDEINCRLDLVEAF
VEDTALRQDLRQHLKRIFDIERLMHTLEKRRANLQHVVKLYQSGIRLPYIKSALERYDGQ
FSTLIKERYLDPLDYWTDDEHLNKFIGLVEASVDLEQLENGEYMISSSYDPKLSALKDER
ETVEKQIHNLHKLTANDLDLPLDKALKLEKTTQFGHVFRITKKEEPKIRKKFSTHFIVLE
TRKDGVKFTNTKLKKLGDQYQKLFEEYTSCQKELVSRVVQTAVTFSEVFETLAGILSELD
VLLSFAELATSCPTPYTRPDITPSDQGDIILEGSRHPCVEAQDGVNFIPNDCALVRGKSW
FQIITGPNMGGKSTYIRQVGVNILMAQVGCFVPCDKARISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIRAPTLFATH
FHELTALAHENADHKSPEKTLLGVANYHVSAIIDPSSRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVTLAREKAAELEDFSPVPIISDDAKEEVGSKRKRVSGPDEISKGAARAHQF
LKEFATLPLEEMDFKQALQQVSKLRNDLEKDAADCCWLQQFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaatctgcaggaacccaacaagttgccggaactcaaacttgatgccaagcaa
gctcaagggtttatctcatttttcaaaaccctaccccaggacccaagggccattcgcttc
ttcgatcgtcgggactattacactgttcacggagagaacgcgactttcattgcaaagaca
tactatcacactactactgctttacgacagttgggtagtggctctgacggtatttccagt
gtcagtgttagtaaaaacatgtttgaaaccattgctcgggatctcctgctggagagaaca
gaccatactttggagctctatgagggtagtgggtcgaattggaggttgacaaaaagtgga
acacccgggaaccttggtagttttgaagatgttctgtttgccaacaatgagatgctagaa
actccagtgattgttgcactttgcctgaatttccgcgaaagtgagtgcactgtgggtctg
ggatatgttgacctgaccaagagggtactaggcttggctgaattcattgatgatagccaa
ttcaccaatgtggagtccgctttggtttctctcggttgcaaggagtgcctgttgccaatg
gaaagcggaaaatccatggagaacagaactttgcatgatgcattgtctaaatgtggtgtt
cttttgacggagagaaagaaaactgaatttaaatcaagagatttggtgcaggatcttagt
cggcttgtcaaggggtctattgagcctgttcgtgatttagttgctagttttgaatatgca
actggggctttgggggcactggtatcttatgcagatttacttgcagatgagagcaactat
ggaaattatactattcagcgttacaaccttgatagtttcatgaggttggattctgctgct
atgagggcattgaatgttctggaaagcaaaacagatgcgaataaaaattttagcttgttt
ggtcttatgaatagaacctgtaccgctggcatggggaaacggttactgaataggtggctg
aaacaacctttgctagatgtagatgaaatcaattgtaggctagatttggtcgaggcattt
gtggaggacactgcacttcgtcaagatctcaggcagcatttgaaaagaattttcgatatt
gagcgattgatgcatactcttgagaagaggagggctaatttgcaacatgttgtaaagctt
tatcagtcaggtattaggcttccttatatcaaaagtgccttggaacgctatgatgggcaa
ttttcaacattgatcaaggaaaggtatttggatccactagattactggactgatgatgaa
cacttgaataagttcattggtcttgttgaagcttctgtggaccttgagcaacttgaaaat
ggggaatatatgatatcgtctagttatgacccaaagctatctgcactgaaggatgagcgt
gaaacagtggaaaaacagatacacaatttgcataaactaactgctaatgatcttgatctt
ccactagataaggcattgaaattggagaaaaccacacaatttggacatgtctttagaatc
acaaaaaaggaggagccaaaaattaggaaaaagttcagtacccattttattgtccttgaa
actcgcaaggatggggtcaagttcaccaatacaaagcttaagaaactaggggatcagtac
caaaagctgtttgaggagtacacaagttgtcagaaggagctggtttctcgagtagttcaa
acagcagtaactttctctgaggtttttgaaactttagctggcattctttctgaattggat
gtccttcttagttttgctgagttggccactagctgtccaactccttatacaagaccagat
atcactccctcggatcagggagatattatattagaaggaagtaggcatccttgtgtggag
gctcaagatggagtgaattttatacctaatgactgtgcacttgttagagggaagagttgg
ttccaaattatcaccggacctaatatgggggggaaatctacatacattcgacaggttggt
gtgaacatactgatggcacaagttggttgttttgttccttgtgataaagcaaggattagt
gttcgtgattgtatttttgctcgtgttggtgctggtgattgccaactccgtggagtttct
actttcatgcaagaaatgcttgaaactgcatcaatattgaaaggagcaactgagaagtcc
ctgataatcattgatgagttgggccgcgggacatcaacttatgatggatttggtttagct
tgggctatttgtgagcatcttgtagaagtaatcagagcaccaacgttatttgcgacacat
tttcatgaattgaccgctttggcccatgaaaatgccgatcacaagtctcctgagaagacc
ttacttggtgtggcgaattatcacgtcagtgcaattattgatccatcaagtcgcaaacta
actatgctttataaggttgagccaggtgcatgtgatcaaagctttggcattcatgttgca
gaatttgcaaactttcctgaaagtgttgttacccttgctagagaaaaggctgcagagttg
gaagatttttcacctgttcccatcatttcagatgatgcaaaggaagaggtgggatctaaa
cggaaacgagtctctggtcctgatgaaatatccaaaggtgctgctcgggcacaccaattc
ttgaaggagtttgccactcttccattagaggagatggactttaagcaggccctgcaacaa
gtaagcaagttaaggaatgatttggagaaggatgcagcagactgttgctggctccagcag
ttcttctag
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